RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TMEM108Q6UXF1 575 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 DEF8Q6ZN54 512 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 PXKQ7Z7A4 578 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 WDR31Q8NA23 367 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 OR5J2Q8NH18 312 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 LILRB1Q8NHL6 650 aaPredicted RBP16.35■□□□□ 0.21
CCDC188-202ENST00000444532 PRSS27Q9BQR3 290 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 FKRPQ9H9S5 495 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 NPAP1Q9NZP6 1156 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 RIMS3Q9UJD0 308 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 NOX1Q9Y5S8 564 aa16.35■□□□□ 0.21
CCDC188-202ENST00000444532 PRRC2AP48634 2157 aaKnown RBP16.35■□□□□ 0.21
CCDC188-202ENST00000444532 LRRN3E7EW58 273 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 RPL36A-HNRNPH2H7BZ11 118 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 SMPD2O60906 423 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 TMCC2O75069 709 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 UPK3AO75631 287 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 HPRP00739 348 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 THRBP10828 461 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 PAX7P23759 505 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 PTAFRP25105 342 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 HOXC12P31275 282 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 RBM34P42696 430 aaKnown RBP16.34■□□□□ 0.21
CCDC188-202ENST00000444532 GSK3BP49841 420 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 PRPS1P60891 318 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 PSME3P61289 254 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 LGALS3BPQ08380 585 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 ZNF74Q16587 644 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 HMBOX1Q6NT76 420 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 TGIF2LYQ8IUE0 185 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 LRRC75A-AS1Q8N1F1 130 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 PIK3C3Q8NEB9 887 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 RADILQ96JH8 1075 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 OR2M2Q96R28 347 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 OBP2BQ9NPH6 170 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 NANSQ9NR45 359 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 GMPR2Q9P2T1 348 aaKnown RBP16.34■□□□□ 0.21
CCDC188-202ENST00000444532 ABCD2Q9UBJ2 740 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 ZNF229Q9UJW7 825 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 MGAT4BQ9UQ53 548 aa16.34■□□□□ 0.21
CCDC188-202ENST00000444532 MAGED1Q9Y5V3 778 aaPredicted RBP16.34■□□□□ 0.21
CCDC188-202ENST00000444532 A0A1W2PR80 420 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 SHOX2O60902 331 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 OR6A2O95222 327 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 CH25HO95992 272 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 WNT11O96014 354 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 IGF2P01344 180 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 HIST1H2ABP04908 130 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 HLA-DOBP13765 273 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 CDH2P19022 906 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 AHCYP23526 432 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 ZNF83P51522 516 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 SH3BGRP55822 239 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 ZP4Q12836 540 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 PIN1Q13526 163 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 ZNF672Q499Z4 452 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 KLHL24Q6TFL4 600 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 NHLRC1Q6VVB1 395 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 HIST3H2AQ7L7L0 130 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 LINGO2Q7L985 606 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 TMEM123Q8N131 208 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 GPR137CQ8N3F9 429 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 OR1K1Q8NGR3 316 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 IGFBPL1Q8WX77 278 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 HIST1H2ACQ93077 130 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 FBXW5Q969U6 566 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 LRR1Q96L50 414 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 HS6ST2Q96MM7 605 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 ALKBH3Q96Q83 286 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 LRRC37BQ96QE4 947 aa16.33■□□□□ 0.2
CCDC188-202ENST00000444532 KCTD14Q9BQ13 255 aaPredicted RBP16.33■□□□□ 0.2
CCDC188-202ENST00000444532 KPNA4O00629 521 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 ABCD4O14678 606 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 ARHGEF9O43307 516 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 DCTN3O75935 186 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 MT-ND1P03886 318 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 ROS1P08922 2347 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 ADORA3P0DMS8 318 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 HOXB1P14653 301 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 IFNA8P32881 189 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 ADAM8P78325 824 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 NKX6-1P78426 367 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 POU3F1Q03052 451 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 ANKRD16Q6P6B7 361 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 CBLL1Q75N03 491 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 NKAIN4Q8IVV8 208 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 MAGEE2Q8TD90 523 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 TMEM171Q8WVE6 324 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 BCL2L2Q92843 193 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 SPAG4Q9NPE6 437 aa16.32■□□□□ 0.2
CCDC188-202ENST00000444532 MEPEQ9NQ76 525 aaPredicted RBP16.32■□□□□ 0.2
CCDC188-202ENST00000444532 F8P00451 2351 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 SLC35F4A4IF30 521 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 ZNF726A6NNF4 738 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 SHISA9B4DS77 424 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 ZNF682O95780 498 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 IFNW1P05000 195 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 ASAH2BP0C7U1 165 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 CD40P25942 277 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms