RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SLC1A3P43003 542 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 PCBP3P57721 371 aaKnown RBP9.74□□□□□ -0.85
TOP3B-210ENST00000444502 PCBP4P57723 403 aaKnown RBP9.74□□□□□ -0.85
TOP3B-210ENST00000444502 SIGLEC14Q08ET2 396 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 ZNF836Q6ZNA1 936 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 GDPGP1Q6ZNW5 385 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 PFN4Q8NHR9 129 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 CCDC74BQ96LY2 380 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 BCL2L14Q9BZR8 327 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 ACTR6Q9GZN1 396 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 PIGUQ9H490 435 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 SDHAF2Q9NX18 166 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 MBD2Q9UBB5 411 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 UPB1Q9UBR1 384 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 HCRTR1O43613 425 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 SLC35E2P0CK97 266 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 KIR2DL3P43628 341 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 ZNF169Q14929 603 aaPredicted RBP9.74□□□□□ -0.85
TOP3B-210ENST00000444502 FBXO42Q6P3S6 717 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 CNIH2Q6PI25 160 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 CADM4Q8NFZ8 388 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 SMAP2Q8WU79 429 aaPredicted RBP9.74□□□□□ -0.85
TOP3B-210ENST00000444502 ORAI3Q9BRQ5 295 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 S1PR5Q9H228 398 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 CHST8Q9H2A9 424 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 FOLH1BQ9HBA9 442 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 HHATLQ9HCP6 504 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 FAM60AQ9NP50 221 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 TRBV2A0A0J9YWF9 115 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 YKT6O15498 198 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 HPGDSO60760 199 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 ZNF43P17038 809 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 TEAD1P28347 426 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 TGFBR2P37173 567 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 PSMB10P40306 273 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 STARP49675 285 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 USF2Q15853 346 aaPredicted RBP9.74□□□□□ -0.85
TOP3B-210ENST00000444502 ELP2Q6IA86 826 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 MTFR2Q6P444 385 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 TMEM88Q6PEY1 159 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 RBM24Q9BX46 236 aaKnown RBP9.74□□□□□ -0.85
TOP3B-210ENST00000444502 UBQLN3Q9H347 655 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 POMT2Q9UKY4 750 aa9.74□□□□□ -0.85
TOP3B-210ENST00000444502 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 PTPRDP23468 1912 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 TRBV23-1A0A0A0MS06 115 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 SYT5O00445 386 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 DSCR3O14972 297 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 P2RX6O15547 441 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 EEF1E1O43324 174 aaKnown RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 ALOX12BO75342 701 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 SIX6O95475 246 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 LCN1P31025 176 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 CCL11P51671 97 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 SNRPGP62308 76 aaKnown RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 CTAG1AP78358 180 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 SMCO1Q147U7 214 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 C9orf135Q5VTT2 229 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 MAMDC2Q7Z304 686 aaPredicted RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 LSRQ86X29 649 aaPredicted RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 PM20D2Q8IYS1 436 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 BBS1Q8NFJ9 593 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 OR4C15Q8NGM1 316 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 C1orf216Q8TAB5 229 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 NXPE2Q96DL1 559 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 KLHL21Q9UJP4 597 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 NEUROG3Q9Y4Z2 214 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 TVP23AA6NH52 213 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 ZNF670-ZNF695F2Z2N8 137 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 SULT2B1O00204 365 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 POU2F2P09086 479 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 TACSTD2P09758 323 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 CTBP2P56545 445 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 C21orf58P58505 322 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 CRMP1Q14194 572 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 SF3A2Q15428 464 aaKnown RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 MBOAT2Q6ZWT7 520 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 PAQR7Q86WK9 346 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 LRRC56Q8IYG6 542 aaPredicted RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 ZC3H10Q96K80 434 aaKnown RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 OPALINQ96PE5 141 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 PFDN5Q99471 154 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 CTSFQ9UBX1 484 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 MRPS2Q9Y399 296 aaKnown RBP9.73□□□□□ -0.85
TOP3B-210ENST00000444502 NLRC5Q86WI3 1866 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 A0A0B4J203 849 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 DISC1C4P0D8 188 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 CBX7O95931 251 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 RLN1P04808 185 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 FABP1P07148 127 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 PRKAR1BP31321 381 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 RFX2P48378 723 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 NXPH1P58417 271 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 DUSP2Q05923 314 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 ALG10Q5BKT4 473 aa9.73□□□□□ -0.85
TOP3B-210ENST00000444502 FIP1L1Q6UN15 594 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms