RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ZNF295-AS1Q8N0V1 137 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 KDM8Q8N371 416 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 PIK3C3Q8NEB9 887 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 PFN4Q8NHR9 129 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 LIPHQ8WWY8 451 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 BPIFA2Q96DR5 249 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 ZNF385AQ96PM9 386 aaKnown RBP9.58□□□□□ -0.88
HDAC6-211ENST00000443563 PIP5K1AQ99755 562 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 ACTR6Q9GZN1 396 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 SLCO5A1Q9H2Y9 848 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 MAGIXQ9H6Y5 334 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 NMNAT1Q9HAN9 279 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-211ENST00000443563 MCCC2Q9HCC0 563 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 NGBQ9NPG2 151 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 IL1RAPQ9NPH3 570 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 TAS2R16Q9NYV7 291 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 RHCGQ9UBD6 479 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 SEC14L4Q9UDX3 406 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 TMEM5Q9Y2B1 443 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 TESMINQ9Y4I5 508 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 V9GYQ6 96 aa9.58□□□□□ -0.88
HDAC6-211ENST00000443563 CIB4A0PJX0 185 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 A6NNC1 897 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 ZNF726A6NNF4 738 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 LRRN3E7EW58 273 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FFAR1O14842 300 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 RNF13O43567 381 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 IFI30P13284 250 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 MPGP29372 298 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 CCKARP32238 428 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 SLC9A3P48764 834 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 CLDN17P56750 224 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 VLDLRP98155 873 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 POU3F1Q03052 451 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 PRKCDQ05655 676 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FAPQ12884 760 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FOXD4Q12950 439 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 TAF11Q15544 211 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FAM98BQ52LJ0 330 aaKnown RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FGD3Q5JSP0 725 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 C1QTNF12Q5T7M4 302 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 TSPO2Q5TGU0 170 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FBXW10Q5XX13 1052 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 MBOAT2Q6ZWT7 520 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 BHLHA15Q7RTS1 189 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 SLC46A3Q7Z3Q1 461 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 HDDC2Q7Z4H3 204 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 ZDHHC21Q8IVQ6 265 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FAM86B1Q8N7N1 296 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 HSD17B8Q92506 261 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 CCDC124Q96CT7 223 aaKnown RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 SLC7A6OSQ96CW6 309 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 ADAD1Q96M93 576 aaKnown RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 WFIKKN1Q96NZ8 548 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 LINC00470Q9BZP3 86 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 NDEL1Q9GZM8 345 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 MMADHCQ9H3L0 296 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-211ENST00000443563 SLC7A10Q9NS82 523 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 MAN2C1Q9NTJ4 1040 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 B3GAT1Q9P2W7 334 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 FREM1Q5H8C1 2179 aa9.57□□□□□ -0.88
HDAC6-211ENST00000443563 A0A087WUU8 490 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 A0A1W2PRG6 482 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 AQP12BA6NM10 295 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 ZNF587BE7ETH6 402 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 C11orf98E9PRG8 122 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 BLOC1S5-TXNDC5H3BN57 136 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 GSC2O15499 205 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 TRAF3IP2O43734 574 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 LYZL6O75951 148 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 KRT36O76013 467 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 GADD45GO95257 159 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 IGHV3-9P01782 118 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 SAGP10523 405 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 ATP6V1B2P21281 511 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 CRYGSP22914 178 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 IGHV1-2P23083 117 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 HOXC12P31275 282 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 DNAJA1P31689 397 aaKnown RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 NTF4P34130 210 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 SELENOPP49908 381 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 SH3BGRP55822 239 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 MS4A2Q01362 244 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 SPIBQ01892 262 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 CHRNB3Q05901 458 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 ANKRD34AQ69YU3 496 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 HMBOX1Q6NT76 420 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 PGM2L1Q6PCE3 622 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 PIWIL3Q7Z3Z3 882 aaKnown RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 TSEN54Q7Z6J9 526 aaKnown RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 TMEM200AQ86VY9 491 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 LSRQ86X29 649 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-211ENST00000443563 AQP12AQ8IXF9 295 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 GPR137CQ8N3F9 429 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 LRRC17Q8N6Y2 441 aa9.56□□□□□ -0.88
HDAC6-211ENST00000443563 ZNF433Q8N7K0 673 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms