RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ANGPT4Q9Y264 503 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC6A5Q9Y345 797 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 KCNE3Q9Y6H6 103 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SOX14O95416 240 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 HMGN2P05204 90 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ACP2P11117 423 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 PPICP45877 212 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 GIPRP48546 466 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 PCYT1AP49585 367 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR2B6P58173 313 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 COX10Q12887 443 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MED22Q15528 200 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 WIPI1Q5MNZ9 446 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 HEPHL1Q6MZM0 1159 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MDGA2Q7Z553 956 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 LSRQ86X29 649 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 IQCF1Q8N6M8 205 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SYT14Q8NB59 555 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SIMC1Q8NDZ2 872 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 KISS1RQ969F8 398 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MOAP1Q96BY2 351 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC25A36Q96CQ1 311 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 IL4I1Q96RQ9 567 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 NUAK2Q9H093 628 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 ABCB9Q9NP78 766 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 PLSCR3Q9NRY6 295 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 MED11Q9P086 117 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 AUP1Q9Y679 476 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 SCN2AQ99250 2005 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 WDFY3Q8IZQ1 3526 aa6.7□□□□□ -1.34
CDC42BPA-208ENST00000442054 C10orf142B7Z368 130 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PLOD3O60568 738 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 MAGEA5P43359 124 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 GABRA4P48169 554 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 RGS8P57771 180 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 C17orf67Q0P5P2 114 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PIN1Q13526 163 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 CCNJQ5T5M9 372 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PRAMEF8Q5VWM4 474 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PRAMEF7Q5VXH5 474 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 OLIG3Q7RTU3 272 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TOR1AIP2Q8NFQ8 470 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR4Q3Q8NH05 313 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM27Q9HBJ8 222 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 CMAHPQ9Y471 501 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 RTTNQ86VV8 2226 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 A0A087WUU8 490 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 A0A0G2JK05 382 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 GJE1A6NN92 205 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 K7EM74 188 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 STX11O75558 287 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 H1F0P07305 194 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 EDN3P14138 238 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 GABRA1P14867 456 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TRHRP34981 398 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 RORCP51449 518 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 HSF1Q00613 529 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PMPCAQ10713 525 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 STK11Q15831 433 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TIMM50Q3ZCQ8 353 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF544Q6NX49 715 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 GPALPP1Q8IXQ4 340 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM163Q8TC26 289 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PPIL3Q9H2H8 161 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC38A1Q9H2H9 487 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC6A15Q9H2J7 730 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 UBQLN4Q9NRR5 601 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 LANCL2Q9NS86 450 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 NDRG3Q9UGV2 375 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF229Q9UJW7 825 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 EMC9Q9Y3B6 208 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 RPL36Q9Y3U8 105 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 LRRK2Q5S007 2527 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 CCDC168Q8NDH2 2452 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 NPIPA5A0A0B4J1W7 369 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PNMA8CA0A1B0GUJ8 204 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 NPIPA7E9PJI5 369 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PPM1BO75688 479 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 NPIPA8P0DM63 369 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PGCP20142 388 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 GALP22466 123 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 PTBP1P26599 531 aaKnown RBP eCLIP6.69□□□□□ -1.344e-6■■□□□ 14.2
CDC42BPA-208ENST00000442054 RAB40BQ12829 278 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 Q6ZS92 163 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 HMGN2P46Q86SG4 172 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 LUZP2Q86TE4 346 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 DND1Q8IYX4 353 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 FAM109AQ8N4B1 249 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TMEM52Q8NDY8 209 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 GIMAP1Q8WWP7 306 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 TRIM63Q969Q1 353 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZG16BQ96DA0 208 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 SIGLEC12Q96PQ1 595 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 SMAD5Q99717 465 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 ACTRT3Q9BYD9 372 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 RERGLQ9H628 205 aa6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 CRNNQ9UBG3 495 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-208ENST00000442054 UPB1Q9UBR1 384 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms