RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DNAJA1P31689 397 aaKnown RBP15.66■□□□□ 0.1
CCDC188-201ENST00000439765 HMGA2P52926 109 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 SLC16A1P53985 500 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 SMIM11AP58511 58 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 SPIBQ01892 262 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 WDR88Q6ZMY6 472 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 BEND4Q6ZU67 534 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 TAAR8Q969N4 342 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 CENPNQ96H22 339 aaPredicted RBP15.66■□□□□ 0.1
CCDC188-201ENST00000439765 REEP1Q9H902 201 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 NTN4Q9HB63 628 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 RASSF1Q9NS23 344 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 VNN3Q9NY84 501 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 SEC14L4Q9UDX3 406 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 PRSS50Q9UI38 385 aa15.66■□□□□ 0.1
CCDC188-201ENST00000439765 NOSIPQ9Y314 301 aaKnown RBP15.66■□□□□ 0.1
CCDC188-201ENST00000439765 A0A1W2PRQ8 180 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 SH3D21A4FU49 640 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 FTCDNL1E5RQL4 147 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 GADD45GO95257 159 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 IGHV3-9P01782 118 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 OR3A2P47893 321 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 DGCR6Q14129 220 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 TRAM2Q15035 370 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 PDK3Q15120 406 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 FAM69AQ5T7M9 428 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 ANKRD34AQ69YU3 496 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 ZNF100Q8IYN0 542 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 MFSD8Q8NHS3 518 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 NINJ1Q92982 152 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 SEMA6AQ9H2E6 1030 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 RNPEPL1Q9HAU8 725 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 MAN2C1Q9NTJ4 1040 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 NKX1-2Q9UD57 310 aaPredicted RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 LYVE1Q9Y5Y7 322 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 TRAV36DV7A0A075B6V5 113 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 C16orf97H3BN30 126 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 TNFRSF11BO00300 401 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 KPNA4O00629 521 aaPredicted RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 GPR171O14626 319 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 ATP6V1G2O95670 118 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 LIMS1P48059 325 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 P2RY4P51582 365 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 FOXD4Q12950 439 aaPredicted RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 PPP1R8Q12972 351 aaKnown RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 SLC17A1Q14916 467 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 DAZAP2Q15038 168 aaPredicted RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 C5orf46Q6UWT4 87 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 CASP12Q6UXS9 341 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 LINC00114Q6XXX2 140 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 STAC2Q6ZMT1 411 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 CXorf67Q86X51 503 aaPredicted RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 NKAIN4Q8IVV8 208 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 OR52J3Q8NH60 311 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 NRGNQ92686 78 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 EPYCQ99645 322 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 PRSS27Q9BQR3 290 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 MED18Q9BUE0 208 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 POLDIP3Q9BY77 421 aaKnown RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 CLEC4MQ9H2X3 399 aaPredicted RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 ANKRD19PQ9H560 264 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 SAMHD1Q9Y3Z3 626 aaKnown RBP15.65■□□□□ 0.1
CCDC188-201ENST00000439765 FLVCR1Q9Y5Y0 555 aa15.65■□□□□ 0.1
CCDC188-201ENST00000439765 ARID1AO14497 2285 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 A6NNC1 897 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 LRRN3E7EW58 273 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 M0R082 166 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 EPXP11678 715 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 GRPRP30550 384 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 NTF4P34130 210 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 GK3PQ14409 553 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 TSC22D1Q15714 1073 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 TMEM225Q6GV28 225 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 GABRG1Q8N1C3 465 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 C10orf53Q8N6V4 93 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 OR9K2Q8NGE7 335 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 OR4C15Q8NGM1 316 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 ZNF417Q8TAU3 575 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 APH1AQ96BI3 265 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 ZC3HAV1LQ96H79 300 aaKnown RBP15.64■□□□□ 0.09
CCDC188-201ENST00000439765 MPP4Q96JB8 637 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 WFIKKN1Q96NZ8 548 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 MOGAT1Q96PD6 335 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 ALPK1Q96QP1 1244 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 ZNF587Q96SQ5 575 aaPredicted RBP15.64■□□□□ 0.09
CCDC188-201ENST00000439765 FUZQ9BT04 418 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 TMEM43Q9BTV4 400 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 NDRG3Q9UGV2 375 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 U3KQV3 271 aa15.64■□□□□ 0.09
CCDC188-201ENST00000439765 FLNAP21333 2647 aaKnown RBP15.64■□□□□ 0.09
CCDC188-201ENST00000439765 TRBV4-1A0A0J9YWV2 114 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 OR2T1O43869 369 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 E2F6O75461 281 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 ART1P52961 327 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 IST1P53990 364 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 SLC34A1Q06495 639 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 FGD3Q5JSP0 725 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 TMEM179BQ7Z7N9 219 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 UBE2J2Q8N2K1 259 aa15.63■□□□□ 0.09
CCDC188-201ENST00000439765 KDM8Q8N371 416 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms