RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SPATA9Q9BWV2 254 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 C20orf27Q9GZN8 174 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ADAM19Q9H013 955 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 TPT1P8Q9HAU6 139 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 B3GAT2Q9NPZ5 323 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 THAP1Q9NVV9 213 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 PCDHB14Q9Y5E9 798 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 NOX1Q9Y5S8 564 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 GPR45Q9Y5Y3 372 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 DSPPQ9NZW4 1301 aa6.76□□□□□ -1.33
VPS50-203ENST00000436177 ARPC4-TTLL3A0A0A6YYG9 625 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 TMEM120BA0PK00 339 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 hCG_2039718K7EN88 272 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 AIM2O14862 343 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 OR2T1O43869 369 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 TGFAP01135 160 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 VIMP08670 466 aaKnown RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 CECR9P0C854 216 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ZCCHC18P0CG32 403 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 PNMTP11086 282 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 NQO1P15559 274 aaKnown RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 NPR2P20594 1047 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 PCMT1P22061 227 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 IGFBP5P24593 272 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ARR3P36575 388 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SRP14P37108 136 aaKnown RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 RPS5P46782 204 aaKnown RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 PPOXP50336 477 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 POLR2JP52435 117 aaKnown RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 CHN2P52757 468 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 TUBA1BP68363 451 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 TUBA4AP68366 448 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ARF1P84077 181 aaKnown RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 SQLEQ14534 574 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ADIPOQQ15848 244 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 NKAPLQ5M9Q1 402 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 FAM120AOSQ5T036 256 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SAMD5Q5TGI4 173 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 CREB3L2Q70SY1 520 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 TUBA1AQ71U36 451 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SPATA21Q7Z572 469 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SERPINA11Q86U17 422 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SNX32Q86XE0 403 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 CCDC36Q8IYA8 594 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 MIER2Q8N344 545 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 C10orf53Q8N6V4 93 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ZIC4Q8N9L1 334 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 MFSD8Q8NHS3 518 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 BBS10Q8TAM1 723 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 MAGEE2Q8TD90 523 aaPredicted RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 BCL2L2Q92843 193 aaPredicted RBP6.75□□□□□ -1.33
VPS50-203ENST00000436177 SLC38A4Q969I6 547 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ZBTB9Q96C00 473 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 FOXN4Q96NZ1 517 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 EPYCQ99645 322 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SPATA5L1Q9BVQ7 753 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 LINC00470Q9BZP3 86 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 ZIM2Q9NZV7 527 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 USP22Q9UPT9 525 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 SPEF1Q9Y4P9 236 aa6.75□□□□□ -1.33
VPS50-203ENST00000436177 IGHV4-61A0A0C4DH41 118 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 SH3PXD2BA1X283 911 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 NR5A2O00482 541 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 ENTPD5O75356 428 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 UPK3AO75631 287 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 C1QCP02747 245 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 PRG2P13727 222 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 DAOP14920 347 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 ZNF23P17027 643 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 PPIBP23284 216 aaKnown RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 APEX1P27695 318 aaKnown RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 IL12AP29459 219 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 THBS2P35442 1172 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 ACAA2P42765 397 aaKnown RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 RPS23P62266 143 aaKnown RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 HOXC5Q00444 222 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 LGALS3BPQ08380 585 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 FADDQ13158 208 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 SCGB2A2Q13296 93 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 SNTB2Q13425 540 aaKnown RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 MPP2Q14168 576 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 MFSD13AQ14CX5 517 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 EFNB3Q15768 340 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 SWI5Q1ZZU3 235 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 C3orf36Q3SXR2 165 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 FAM69AQ5T7M9 428 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 GKAP1Q5VSY0 366 aaPredicted RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 UGT2A3Q6UWM9 527 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 IL17RELQ6ZVW7 336 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 UEVLDQ8IX04 471 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 CLIP4Q8N3C7 705 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 SVOPLQ8N434 492 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 ARIH2OSQ8N7S6 290 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 FAM169BQ8N8A8 192 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 NUP37Q8NFH4 326 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 IL17RDQ8NFM7 739 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 DNAJA4Q8WW22 397 aaPredicted RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 NEU4Q8WWR8 484 aaPredicted RBP6.74□□□□□ -1.33
VPS50-203ENST00000436177 SLC35B4Q969S0 331 aa6.74□□□□□ -1.33
VPS50-203ENST00000436177 VPS33AQ96AX1 596 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms