RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
GARNL3-204ENST00000429629 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 EFCAB9A8MZ26 197 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 CENPBD1B2RD01 187 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 HNRNPRO43390 633 aaKnown RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 TRAF3IP2O43734 574 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 AKAP8O43823 692 aaKnown RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 PTP4A3O75365 173 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 FCGR1AP12314 374 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 IGFBP2P18065 325 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 MAKP20794 623 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 FPR3P25089 353 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 NTF4P34130 210 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 SIRPAP78324 504 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 FHL1Q13642 323 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 C1DQ13901 141 aaKnown RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 CCNIQ14094 377 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 FBXW9Q5XUX1 488 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 AAED1Q7RTV5 226 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 NANOGNBQ7Z5D8 188 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 ZER1Q7Z7L7 766 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 OAFQ86UD1 273 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 UEVLDQ8IX04 471 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF100Q8IYN0 542 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 POMGNT2Q8NAT1 580 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 APH1AQ96BI3 265 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 BOD1Q96IK1 185 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 ADAD1Q96M93 576 aaKnown RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF385AQ96PM9 386 aaKnown RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 RBM24Q9BX46 236 aaKnown RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 LINC00470Q9BZP3 86 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 SEC14L4Q9UDX3 406 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 AP4S1Q9Y587 144 aa13.25□□□□□ -0.29
GARNL3-204ENST00000429629 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-204ENST00000429629 FAM90A27PA6NNH2 459 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 EEF1E1-BLOC1S5C9J1V9 151 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 BLOC1S5-TXNDC5H3BN57 136 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 CLOCKO15516 846 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 EEF1E1O43324 174 aaKnown RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 DEAF1O75398 565 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 SMNDC1O75940 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 CLDN1O95832 211 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 HPRP00739 348 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 SAGP10523 405 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 PSMB1P20618 241 aaKnown RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 CBLP22681 906 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 AHCYP23526 432 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 DNAJA1P31689 397 aaKnown RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 CD79BP40259 229 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 GSSP48637 474 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 MICAQ29983 383 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 ZBED5Q49AG3 693 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF770Q6IQ21 691 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 ZFP1Q6P2D0 407 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 HDDC2Q7Z4H3 204 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 GABRG1Q8N1C3 465 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 OR6X1Q8NH79 312 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 OPN3Q9H1Y3 402 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 MALT1Q9UDY8 824 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
GARNL3-204ENST00000429629 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
GARNL3-204ENST00000429629 NKX2-6A6NCS4 301 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 RNF13O43567 381 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 PIP5K1CO60331 668 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 OR10H3O60404 316 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 CCNB2O95067 398 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 PPP3CBP16298 524 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 ARHGDIAP52565 204 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 RPL18Q07020 188 aaKnown RBP13.23□□□□□ -0.29
GARNL3-204ENST00000429629 COX10Q12887 443 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 TSPAN31Q12999 210 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 STK11Q15831 433 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 ABHD12BQ7Z5M8 362 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-204ENST00000429629 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 KDM8Q8N371 416 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 GNPDA2Q8TDQ7 276 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF775Q96BV0 537 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-204ENST00000429629 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 DGCR6LQ9BY27 220 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 NPDC1Q9NQX5 325 aaPredicted RBP13.23□□□□□ -0.29
GARNL3-204ENST00000429629 INIPQ9NRY2 104 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
GARNL3-204ENST00000429629 DIDO1Q9BTC0 2240 aaKnown RBP13.23□□□□□ -0.29
GARNL3-204ENST00000429629 A0A1W2PRG6 482 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 ZNF726A6NNF4 738 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 C16orf97H3BN30 126 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 RPL36A-HNRNPH2H7BZ11 118 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 PDLIM1O00151 329 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 GNGT2O14610 69 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 CDC42EP2O14613 210 aa13.22□□□□□ -0.29
GARNL3-204ENST00000429629 SLC43A1O75387 559 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms