RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 S100A16Q96FQ6 103 aaKnown RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 DDOQ99489 341 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 MED18Q9BUE0 208 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 C1QTNF6Q9BXI9 259 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 TPSD1Q9BZJ3 242 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 GHITMQ9H3K2 345 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 NT5DC2Q9H857 520 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 ZMAT3Q9HA38 289 aaKnown RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 CMC2Q9NRP2 79 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 EVA1BQ9NVM1 165 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 LRIT1Q9P2V4 623 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 FARSAQ9Y285 508 aaKnown RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 IGF2RP11717 2491 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 C4orf47A7E2U8 309 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 C2orf74A8MZ97 194 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 ST8SIA5O15466 376 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 TXNL1O43396 289 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SLC25A12O75746 678 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 KDM4BO94953 1096 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 TFP02787 698 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 CFL1P23528 166 aaKnown RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 MNDAP41218 407 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 MAZP56270 477 aaKnown RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 BTG2P78543 158 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 ZNF674Q2M3X9 581 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SCGB2B2Q4G0G5 96 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 EOGTQ5NDL2 527 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 OR5M10Q6IEU7 315 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 METAP1DQ6UB28 335 aaPredicted RBP7.4□□□□□ -1.22
HPS4-205ENST00000429411 CD300LDQ6UXZ3 194 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SHISA6Q6ZSJ9 500 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 NKAIN3Q8N8D7 197 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 SYNPRQ8TBG9 265 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 FCAMRQ8WWV6 532 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 RSC1A1Q92681 617 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 ZNF681Q96N22 645 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 NRSN2Q9GZP1 204 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 PLXNB3Q9ULL4 1909 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 ZFYVE26Q68DK2 2539 aa7.4□□□□□ -1.22
HPS4-205ENST00000429411 CACNA1BQ00975 2339 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 TCRBV21S2A2A0A5A6 115 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 HCRTR2O43614 444 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 ITGA10O75578 1167 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 GPANK1O95872 356 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 ANXA7P20073 488 aaKnown RBP7.4□□□□□ -1.23
HPS4-205ENST00000429411 ACTC1P68032 377 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 ACTA1P68133 377 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 HSF2Q03933 536 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 GFOD2Q3B7J2 385 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 ARHGAP11BQ3KRB8 267 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 AARDQ4LEZ3 155 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 TMEM196Q5HYL7 178 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 SLC22A25Q6T423 547 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 Q6ZS52 159 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 ZNF767PQ75MW2 155 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 COMMD7Q86VX2 200 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 SLITRK4Q8IW52 837 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 OR52I2Q8NH67 350 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 MOSPD2Q8NHP6 518 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 MAP6Q96JE9 813 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 PDCD10Q9BUL8 212 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 PITHD1Q9GZP4 211 aaPredicted RBP7.4□□□□□ -1.23
HPS4-205ENST00000429411 S1PR5Q9H228 398 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 RANBP3Q9H6Z4 567 aaPredicted RBP7.4□□□□□ -1.23
HPS4-205ENST00000429411 KIR3DX1Q9H7L2 352 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 FKRPQ9H9S5 495 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 MEPEQ9NQ76 525 aaPredicted RBP7.4□□□□□ -1.23
HPS4-205ENST00000429411 PRTFDC1Q9NRG1 225 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 CYSLTR2Q9NS75 346 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 MED17Q9NVC6 651 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 CYP8B1Q9UNU6 501 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 SIGLEC7Q9Y286 467 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 R4GN57 208 aa7.4□□□□□ -1.23
HPS4-205ENST00000429411 OTOGLQ3ZCN5 2332 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 USP34Q70CQ2 3546 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 B8ZZF3 427 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 XKRYO14609 159 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CHP2O43745 196 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 SDC3O75056 442 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 WNT1P04628 370 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 S100A9P06702 114 aaKnown RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 CTSBP07858 339 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 RBMS1P29558 406 aaKnown RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 CCKBRP32239 447 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 FRKP42685 505 aaPredicted RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 ZNF136P52737 540 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 HHEXQ03014 270 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 MRM1Q6IN84 353 aaKnown RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 KIRREL2Q6UWL6 708 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 ALKAL2Q6UX46 152 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 ERVMER34-1Q9H9K5 563 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 LIN7BQ9HAP6 207 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 RXFP3Q9NSD7 469 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CENPMQ9NSP4 180 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CPNE7Q9UBL6 633 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 GRHPRQ9UBQ7 328 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 KCNN3Q9UGI6 736 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 FBXL3Q9UKT7 428 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CES1P1Q9UKY3 287 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms