RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 APBB3O95704 486 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 SERPINA3P01011 423 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 SPI1P17947 270 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 NFYAP23511 347 aaPredicted RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 TAS2R43P59537 309 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 PLAURQ03405 335 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ZNHIT3Q15649 155 aaPredicted RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 DCAF12L2Q5VW00 463 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 LRRN1Q6UXK5 716 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 IDO2Q6ZQW0 420 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 PAQR7Q86WK9 346 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 SMIM4Q8WVI0 70 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 C1QTNF7Q9BXJ2 289 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ZNF350Q9GZX5 532 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 EXO5Q9H790 373 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 WDR76Q9H967 626 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 PFDN2Q9UHV9 154 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 FBXO4Q9UKT5 387 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 KIF26AQ9ULI4 1882 aaPredicted RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 TRAV8-7A0A075B6U6 113 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 LPLP06858 475 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 ACHEP22303 614 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 CDKN2AP42771 156 aaKnown RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 P2RX1P51575 399 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 GRM7Q14831 915 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 FAM220AQ7Z4H9 259 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 GRAMD2AQ8IUY3 354 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 RCBTB1Q8NDN9 531 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 SLC25A38Q96DW6 304 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 OR2A5Q96R48 311 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 PDCD10Q9BUL8 212 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 RABL2AQ9UBK7 228 aaPredicted RBP11.42□□□□□ -0.58
CDH3-202ENST00000429102 RP1P56715 2156 aa11.42□□□□□ -0.58
CDH3-202ENST00000429102 UBE2QL1A1L167 161 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 EIF1AYO14602 144 aaKnown RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 GPR75O95800 540 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 APODP05090 189 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 UBL4AP11441 157 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 EIF1AXP47813 144 aaKnown RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 RPS15AP62244 130 aaKnown RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 RPS11P62280 158 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDH3-202ENST00000429102 ARHGAP11AQ6P4F7 1023 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 CBLN3Q6UW01 205 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 AVL9Q8NBF6 648 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 SLITRK2Q9H156 845 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 FAM60AQ9NP50 221 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 RXFP3Q9NSD7 469 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ZNF230Q9UIE0 474 aaPredicted RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 C19orf53Q9UNZ5 99 aaPredicted RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 MOKQ9UQ07 419 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 SLC22A13Q9Y226 551 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 NPFFR2Q9Y5X5 522 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 FRYLO94915 3013 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 CA3P07451 260 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ART1P52961 327 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ZNF425Q6IV72 752 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ABHD13Q7L211 337 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 MDGA2Q7Z553 956 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 CD163Q86VB7 1156 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 MOGAT1Q96PD6 335 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 UBL7Q96S82 380 aaPredicted RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 GFI1Q99684 422 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 HDAC8Q9BY41 377 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 B3GNT4Q9C0J1 378 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 SYT4Q9H2B2 425 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 THAP10Q9P2Z0 257 aaPredicted RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 LAMP5Q9UJQ1 280 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 RBBP9O75884 186 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 FAM199XQ6PEV8 388 aaPredicted RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 TMEM205Q6UW68 189 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 OR5AK2Q8NH90 309 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 STK35Q8TDR2 534 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 CASTOR1Q8WTX7 329 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ST8SIA4Q92187 359 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 FAM46BQ96A09 425 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 RAB7BQ96AH8 199 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ZFYVE21Q9BQ24 234 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 RAB11FIP5Q9BXF6 653 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ATG5Q9H1Y0 275 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 ABRACLQ9P1F3 81 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 SLC22A7Q9Y694 548 aa11.41□□□□□ -0.58
CDH3-202ENST00000429102 MTCL1Q9Y4B5 1905 aaKnown RBP11.41□□□□□ -0.58
CDH3-202ENST00000429102 STARP49675 285 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 TAS2R20P59543 309 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 LTBQ06643 244 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 ACSM1Q08AH1 577 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 ARHGEF6Q15052 776 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 TAF13Q15543 124 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 UBE2NLQ5JXB2 153 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 C1QL3Q5VWW1 255 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 SLC6A19Q695T7 634 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 TMEM81Q6P7N7 255 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 TAF8Q7Z7C8 310 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 CAMKVQ8NCB2 501 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 SERINC2Q96SA4 455 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 ANKRD19PQ9H560 264 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms