RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 HIST3H2AQ7L7L0 130 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 WDR31Q8NA23 367 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 CCDC197Q8NCU1 140 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 PIK3C3Q8NEB9 887 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 RP9Q8TA86 221 aaKnown RBP18.12■□□□□ 0.49
HSPG2-205ENST00000427897 HIST1H2ACQ93077 130 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 TAMM41Q96BW9 452 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 SLC7A7Q9UM01 511 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 HIVEP1P15822 2718 aa18.12■□□□□ 0.49
HSPG2-205ENST00000427897 SHISA9B4DS77 424 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 NDUFAB1O14561 156 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 UPK3AO75631 287 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 INHBBP09529 407 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 PAX7P23759 505 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 GZMMP51124 257 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 FABP6P51161 128 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 LGALS3BPQ08380 585 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 CARD17Q5XLA6 110 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 RBM45Q8IUH3 476 aaKnown RBP18.11■□□□□ 0.49
HSPG2-205ENST00000427897 FBXL14Q8N1E6 418 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 POU5F2Q8N7G0 328 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 SCAIQ8N9R8 606 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 ADPRHL1Q8NDY3 354 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 OR1K1Q8NGR3 316 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 RCN3Q96D15 328 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 LRRC37BQ96QE4 947 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 AMBRA1Q9C0C7 1298 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 MYLK2Q9H1R3 596 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 OBP2BQ9NPH6 170 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 B3GAT2Q9NPZ5 323 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 MRPL39Q9NYK5 338 aaKnown RBP18.11■□□□□ 0.49
HSPG2-205ENST00000427897 AP3M1Q9Y2T2 418 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 NOX1Q9Y5S8 564 aa18.11■□□□□ 0.49
HSPG2-205ENST00000427897 LOC102725191A0A1B0GVB3 256 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 SERPINI2O75830 405 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 MT-ATP6P00846 226 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 BGLAPP02818 100 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 SOD3P08294 240 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 UMPSP11172 480 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 SH3BGRP55822 239 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-205ENST00000427897 TAS2R41P59536 307 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 POU3F1Q03052 451 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-205ENST00000427897 TBRG1Q3YBR2 411 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 LRRC23Q53EV4 343 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-205ENST00000427897 ANKRD16Q6P6B7 361 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 ARPINQ7Z6K5 226 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 BIVMQ86UB2 503 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 CARM1Q86X55 608 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 CALHM3Q86XJ0 350 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 OR2T12Q8NG77 320 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 BCAS4Q8TDM0 211 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 MPP4Q96JB8 637 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 ZNF583Q96ND8 569 aa18.1■□□□□ 0.49
HSPG2-205ENST00000427897 ZNF701Q9NV72 531 aaPredicted RBP18.1■□□□□ 0.49
HSPG2-205ENST00000427897 ITPR3Q14573 2671 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 A0A096LPE4 126 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 A0A1W2PPZ6 126 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 FAM171A2A8MVW0 826 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 C11orf98E9PRG8 122 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 MS4A18H0YCH9 400 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 FXYD1O00168 92 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 KPNA4O00629 521 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-205ENST00000427897 SMAD7O15105 426 aaKnown RBP18.09■□□□□ 0.49
HSPG2-205ENST00000427897 GSTA4O15217 222 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 ADORA3P0DMS8 318 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 COX4I1P13073 169 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 IFNA8P32881 189 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 CDKN1AP38936 164 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 LTBQ06643 244 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 PUDPQ08623 228 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 NPTX1Q15818 432 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 MS4A18Q3C1V0 323 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 DEF8Q6ZN54 512 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 KRTAP1-3Q8IUG1 177 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 OR4D11Q8NGI4 311 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 OR5J2Q8NH18 312 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 CMTM5Q96DZ9 223 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 SLC41A3Q96GZ6 507 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 TPD52L3Q96J77 140 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 HS6ST2Q96MM7 605 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 MOGAT1Q96PD6 335 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 EMC6Q9BV81 110 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 GSX1Q9H4S2 264 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-205ENST00000427897 EFCAB1Q9HAE3 211 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 NANSQ9NR45 359 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 B3GAT1Q9P2W7 334 aa18.09■□□□□ 0.49
HSPG2-205ENST00000427897 ELOVL7A1L3X0 281 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 FAM220BPB1ANY3 271 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 LRRN3E7EW58 273 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 H7C1Q1 480 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 M0R3G1 203 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 CH25HO95992 272 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 DANCRP0C864 163 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 PAX1P15863 534 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 CAPZA2P47755 286 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 ARF1P84077 181 aaKnown RBP18.08■□□□□ 0.48
HSPG2-205ENST00000427897 PGGHGQ32M88 737 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 LINC00114Q6XXX2 140 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 OR6N1Q8NGY5 312 aa18.08■□□□□ 0.48
HSPG2-205ENST00000427897 LZICQ8WZA0 190 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms