RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR10J4P0C629 311 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 ENDOGQ14249 297 aaKnown RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 ADIRFQ15847 76 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 CCNL2Q96S94 520 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 VPS25Q9BRG1 176 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SOX7Q9BT81 388 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 ACPTQ9BZG2 426 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SMG9Q9H0W8 520 aaKnown RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 MOB1AQ9H8S9 216 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TAF9BQ9HBM6 251 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 PCDHGA1Q9Y5H4 931 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 POMT1Q9Y6A1 747 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 F10P00742 488 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 THBS1P07996 1170 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 DUSP1P28562 367 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TPMTP51580 245 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 RUNX3Q13761 415 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 DPY19L2P2Q6ZN68 376 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SLC25A32Q9H2D1 315 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SYT5O00445 386 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 CALCRP30988 508 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TNFRSF4P43489 277 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 XCR1P46094 333 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HTR5AP47898 357 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 POU3F1Q03052 451 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 TIGITQ495A1 244 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 CDONQ4KMG0 1287 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 PXDC1Q5TGL8 231 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 Q6ZTK2 550 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 MYOCOSA0A1B0GUC4 107 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HSPB2A8KAH6 182 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 OR7C1O76099 320 aaPredicted RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HMGN2P05204 90 aaKnown RBP13.43□□□□□ -0.26
PTPN13-203ENST00000427191 HSPB2Q16082 182 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 RANBP10Q6VN20 620 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SIGLECL1Q8N7X8 197 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 DUSP19Q8WTR2 217 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 GAB3Q8WWW8 586 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 IL17FQ96PD4 163 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 EPHX3Q9H6B9 360 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 YKT6O15498 198 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 OR2C1O95371 312 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SSTR2P30874 369 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 GABRA2P47869 451 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 SLC35D1Q9NTN3 355 aa13.43□□□□□ -0.26
PTPN13-203ENST00000427191 A0A0B4J2A0 478 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 PRSS44E7EML9 344 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF587BE7ETH6 402 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 CLEC3BP05452 202 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ADRA2CP18825 462 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 DPPA2Q7Z7J5 298 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GPR26Q8NDV2 337 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 SHPKQ9UHJ6 478 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 TRDV1A0A1B0GX56 115 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 TIMM8AO60220 97 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GDF1P27539 372 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 BPIFB3P59826 476 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 BCL7AQ4VC05 210 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-203ENST00000427191 TMEM43Q9BTV4 400 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 BARHL1Q9BZE3 327 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 MT-ATP6P00846 226 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 MTHFD2P13995 350 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ACKR3P25106 362 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 SLC7A9P82251 487 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF91Q05481 1191 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 DMWDQ09019 674 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 FCRLBQ6BAA4 426 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 BORCS6Q96GS4 357 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 OR7D2Q96RA2 312 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 BET1O15155 118 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GIPP09681 153 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-203ENST00000427191 CTRB1P17538 263 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 LBX1P52954 281 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ILKQ13418 452 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GAB1Q13480 694 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 CTRB2Q6GPI1 263 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 STEAP1BQ6NZ63 245 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 TIPARPQ7Z3E1 657 aaKnown RBP13.42□□□□□ -0.26
PTPN13-203ENST00000427191 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 DNMT3BQ9UBC3 853 aaKnown RBP13.42□□□□□ -0.26
PTPN13-203ENST00000427191 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 TNFSF12O43508 249 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GPR75O95800 540 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 F2RP25116 425 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 IL34Q6ZMJ4 242 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 USP51Q70EK9 711 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 GRINAQ7Z429 371 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 FKRPQ9H9S5 495 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 DECR2Q9NUI1 292 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF620Q6ZNG0 422 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 ZNRF4Q8WWF5 429 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 VDAC3Q9Y277 283 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 PRLHRP49683 370 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 CLDN10P78369 228 aa13.42□□□□□ -0.26
PTPN13-203ENST00000427191 SSBP1Q04837 148 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms