RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 DRD5P21918 477 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 RPS4Y1P22090 263 aaKnown RBP11.9□□□□□ -0.5
COL12A1-205ENST00000425443 SLC2A5P22732 501 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 MEOX2P50222 304 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 RNF4P78317 190 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 GABREP78334 506 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 BDH1Q02338 343 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 ZSWIM7Q19AV6 140 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 ZBTB37Q5TC79 503 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 HYLS1Q96M11 299 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 DGAT2Q96PD7 388 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 FOLH1BQ9HBA9 442 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 CMC2Q9NRP2 79 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 SOHLH2Q9NX45 425 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 SIGLEC7Q9Y286 467 aa11.9□□□□□ -0.5
COL12A1-205ENST00000425443 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 C7orf66A4D0T2 115 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ANKRD61A6NGH8 418 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 FMO6PO60774 539 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 CLN5O75503 358 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TOXO94900 526 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 PLATP00750 562 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TCRBP04435 133 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 EMDP50402 254 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 MAZP56270 477 aaKnown RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 BTG1P62324 171 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 FHL1Q13642 323 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ST3GAL2Q16842 350 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TMEM255AQ5JRV8 349 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 OTPQ5XKR4 325 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 C5orf46Q6UWT4 87 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 RTL4Q6ZR62 310 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 SERPINA12Q8IW75 414 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 C19orf47Q8N9M1 422 aaKnown RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF431Q8TF32 576 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 Q9N2J8 555 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 GNG8Q9UK08 70 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 SLC35A3Q9Y2D2 325 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 DTX4Q9Y2E6 619 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 NKX2-2O95096 273 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 WNT1P04628 370 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 SBK2P0C263 348 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 GALP22466 123 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 F8A1P23610 371 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 SLC6A6P31641 620 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 CCR4P51679 360 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 MGAT2Q10469 447 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 FZD2Q14332 565 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 SLC6A19Q695T7 634 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TEX261Q6UWH6 196 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 Q6ZS52 159 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TMPRSS11FQ6ZWK6 438 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF671Q8TAW3 534 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TRIM2Q9C040 744 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 SLC25A18Q9H1K4 315 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 PRTFDC1Q9NRG1 225 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ELF5Q9UKW6 265 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 U3KQ87 197 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TEX13CA0A0J9YWL9 993 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 A0A1B0GV90 55 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 IDSB3KWA1 339 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TFP02787 698 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 CLDN12P56749 244 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ZP1P60852 638 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ODF4Q2M2E3 257 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 TUSC1Q2TAM9 212 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF767PQ75MW2 155 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 C10orf53Q8N6V4 93 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 MMABQ96EY8 250 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-205ENST00000425443 POLE3Q9NRF9 147 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 ST6GALNAC2Q9UJ37 374 aa11.89□□□□□ -0.51
COL12A1-205ENST00000425443 G3V3Q6 166 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 HPXP02790 462 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 PSG6Q00889 435 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 FAM53BQ14153 422 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 SNX33Q8WV41 574 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 OR14A2Q96R54 314 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 SLC38A3Q99624 504 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 TPSD1Q9BZJ3 242 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 MKKSQ9NPJ1 570 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-205ENST00000425443 FLRT3Q9NZU0 649 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 POMT2Q9UKY4 750 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 FLVCR2Q9UPI3 526 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 VPS13AQ96RL7 3174 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
COL12A1-205ENST00000425443 RPP14O95059 124 aaKnown RBP11.88□□□□□ -0.51
COL12A1-205ENST00000425443 MPC2O95563 127 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 MAP2K6P52564 334 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 BTG2P78543 158 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 HES5Q5TA89 166 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 DMKNQ6E0U4 476 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-205ENST00000425443 FAM160A2Q8N612 972 aaPredicted RBP11.88□□□□□ -0.51
COL12A1-205ENST00000425443 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms