RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 GIPRP48546 466 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 PUDPQ08623 228 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 ZNF239Q16600 458 aaKnown RBP12□□□□□ -0.49
PRPF39-202ENST00000424478 GFRALQ6UXV0 394 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 LINC00471Q8N535 108 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 MEIOBQ8N635 442 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 SYT14Q8NB59 555 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 SDR9C7Q8NEX9 313 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 HIF3AQ9Y2N7 669 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
PRPF39-202ENST00000424478 FAM171A2A8MVW0 826 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 NDUFB2O95178 105 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 CLUP10909 449 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 NOS3P29474 1203 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 PTGS2P35354 604 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
PRPF39-202ENST00000424478 OR51L1Q8NGJ5 315 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 CNIH3Q8TBE1 160 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 TSSK2Q96PF2 358 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 TSPAN32Q96QS1 320 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 HCAR1Q9BXC0 346 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 GABARAPL3Q9BY60 117 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 POLDIP3Q9BY77 421 aaKnown RBP11.99□□□□□ -0.49
PRPF39-202ENST00000424478 PRRG4Q9BZD6 226 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 VCX3BQ9H321 246 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 AMBNQ9NP70 447 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 PRKYO43930 277 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 PMS2P2O95744 297 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 ACTL6AO96019 429 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 GSTM3P21266 225 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 SLC35A1P78382 337 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 ADARB1P78563 741 aaKnown RBP11.99□□□□□ -0.49
PRPF39-202ENST00000424478 MYBPC1Q00872 1141 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 ACKR1Q16570 336 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 PACRGLQ8N7B6 248 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 LRRC75AQ8NAA5 344 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 CPT1CQ8TCG5 803 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 TFAP2CQ92754 450 aa11.99□□□□□ -0.49
PRPF39-202ENST00000424478 BHLHE40O14503 412 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 MT-ATP6P00846 226 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 HIST1H1CP16403 213 aaKnown RBP11.98□□□□□ -0.49
PRPF39-202ENST00000424478 ABOP16442 354 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 RAC3P60763 192 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 H3F3AP84243 136 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
PRPF39-202ENST00000424478 PTCHD4Q6ZW05 846 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CHMP1BQ7LBR1 199 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 PARP8Q8N3A8 854 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 TCEANCQ8N8B7 351 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 LSM14AQ8ND56 463 aaKnown RBP11.98□□□□□ -0.49
PRPF39-202ENST00000424478 BBS1Q8NFJ9 593 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 NMNAT3Q96T66 252 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 SLX1AQ9BQ83 275 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 RHNO1Q9BSD3 238 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 MRPL39Q9NYK5 338 aaKnown RBP11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CACNA1CQ13936 2221 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 HIVEP3Q5T1R4 2406 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 FAM208BQ5VWN6 2430 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 GJE1A6NN92 205 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 ZAR1LA6NP61 321 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 AQP7O14520 342 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 GPANK1O95872 356 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CAPGP40121 348 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 NUDT6P53370 316 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 IL5RAQ01344 420 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 COX10Q12887 443 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CAMK2DQ13557 499 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 SLC27A4Q6P1M0 643 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 PAQR6Q6TCH4 344 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 FCRLAQ7L513 359 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 OR52L1Q8NGH7 329 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 OR52E2Q8NGJ4 325 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 AQP7P3A6NL99 342 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 APOL3O95236 402 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CSNK2A1P68400 391 aaPredicted RBP11.98□□□□□ -0.49
PRPF39-202ENST00000424478 PGGHGQ32M88 737 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 ZNF555Q8NEP9 628 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 CALHM2Q9HA72 323 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 INIPQ9NRY2 104 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 UBAP1Q9NZ09 502 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 TRAPPC4Q9Y296 219 aa11.98□□□□□ -0.49
PRPF39-202ENST00000424478 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 ESPL1Q14674 2120 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 RCBTB2O95199 551 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 BIDP55957 195 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 CLDN17P56750 224 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 FMODQ06828 376 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 IGFBP7Q16270 282 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 SNAPC1Q16533 368 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 LYPD4Q6UWN0 246 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 TUSC5Q8IXB3 177 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 OR2T33Q8NG76 320 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 ZNRF4Q8WWF5 429 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 RASSF4Q9H2L5 321 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 ING1Q9UK53 422 aaPredicted RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 A0A1B0GVC2 190 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms