RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 A0A0J9YW62 118 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 CENPBD1B2RD01 187 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 SULT2B1O00204 365 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 SLC1A7O00341 560 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TLX2O43763 284 aaPredicted RBP12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 PRKYO43930 277 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR6A2O95222 327 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 PDGFAP04085 211 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TFPIP10646 304 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 PTNP21246 168 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 SHC1P29353 583 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TUBA4AP68366 448 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 SLC35A2P78381 396 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TOMM20Q15388 145 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 ADCK1Q86TW2 530 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 SIAH3Q8IW03 269 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 IQCF1Q8N6M8 205 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TCEANCQ8N8B7 351 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR5M1Q8NGP8 315 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 MOSPD2Q8NHP6 518 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 RFKQ969G6 155 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 ABHD17AQ96GS6 310 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR5B2Q96R09 309 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 ARHGAP9Q9BRR9 750 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 CCNB1IP1Q9NPC3 277 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 HAO2Q9NYQ3 351 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 B3GAT1Q9P2W7 334 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 TPRKBQ9Y3C4 175 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 PCDHGB1Q9Y5G3 927 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 NOX1Q9Y5S8 564 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 BSNQ9UPA5 3926 aa12.78□□□□□ -0.36
SHMT1P1-201ENST00000419974 BOD1L1Q8NFC6 3051 aa12.77□□□□□ -0.36
SHMT1P1-201ENST00000419974 CLCA1A8K7I4 914 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 PRODHO43272 600 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ADORA3P0DMS8 318 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF3P17036 446 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 POU3F2P20265 443 aaPredicted RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 DAP3P51398 398 aaKnown RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC25A1P53007 311 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 CLDN15P56746 228 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 CLDN18P56856 261 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 CTXN1P60606 82 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 RPL27P61353 136 aaKnown RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 RNFT1Q5M7Z0 435 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ARMC4Q5T2S8 1044 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 RNLSQ5VYX0 342 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 HDDC2Q7Z4H3 204 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 GID4Q8IVV7 300 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF786Q8N393 782 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ARIH2OSQ8N7S6 290 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 NPEPL1Q8NDH3 523 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR2V1Q8NHB1 315 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF519Q8TB69 540 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 CNIH3Q8TBE1 160 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 CPNE4Q96A23 557 aaPredicted RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC25A36Q96CQ1 311 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZHX1-C8orf76Q96EF9 292 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 LRR1Q96L50 414 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 OXGR1Q96P68 337 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 ERMAPQ96PL5 475 aaPredicted RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 KATNB1Q9BVA0 655 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 NMNAT2Q9BZQ4 307 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 RASSF1Q9NS23 344 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 SCN3BQ9NY72 215 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 PSORS1C1Q9UIG5 152 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 RPL36Q9Y3U8 105 aaKnown RBP12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
SHMT1P1-201ENST00000419974 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 A0A1W2PNR3 127 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 IRGMA1A4Y4 181 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 A6NIZ1 184 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 RIIAD1A6NNX1 92 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 AQP7O14520 342 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 RNF13O43567 381 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 PPP1R3DO95685 299 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 CRYABP02511 175 aaKnown RBP12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF24P17028 368 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 NOS3P29474 1203 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 SFTPDP35247 375 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 SLC16A1P53985 500 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 CARD18P57730 90 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 OR2B6P58173 313 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 RAP1BP61224 184 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 RAP1AP62834 184 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 ITGADQ13349 1161 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 EML6Q6ZMW3 1958 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 PTP4A1Q93096 173 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 PNPLA2Q96AD5 504 aa12.76□□□□□ -0.37
SHMT1P1-201ENST00000419974 ZNF582Q96NG8 517 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms