RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 AHCYP23526 432 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PSMB9P28065 219 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 HTR1FP30939 366 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 ATP6V1E1P36543 226 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 CD96P40200 585 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 MEOX1P50221 254 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 GTF2A1P52655 376 aaPredicted RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SLC16A1P53985 500 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 OR2B6P58173 313 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 CTXN1P60606 82 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 ERVK-25P63136 954 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SLC35A1P78382 337 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 FOXK2Q01167 660 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 POU3F1Q03052 451 aaPredicted RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 RAB40BQ12829 278 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SRSF6Q13247 344 aaKnown RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 DEFB109BQ30KR1 87 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 KLHL12Q53G59 568 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 KLHL22Q53GT1 634 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF766Q5HY98 468 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SLC35D3Q5M8T2 416 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PDSS1Q5T2R2 415 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 GTF2IRD2BQ6EKJ0 949 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 LAIR2Q6ISS4 152 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PLBD1Q6P4A8 553 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 LEG1Q6P5S2 330 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 GTF2IRD2Q86UP8 949 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SLC22A16Q86VW1 577 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 UEVLDQ8IX04 471 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 LRRC17Q8N6Y2 441 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 POMGNT2Q8NAT1 580 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SLC37A3Q8NCC5 494 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 MDS2Q8NDY4 140 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PROKR2Q8NFJ6 384 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 MOSPD2Q8NHP6 518 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 POC1BQ8TC44 478 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 MUL1Q969V5 352 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SIGLEC12Q96PQ1 595 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 TSPAN32Q96QS1 320 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SNX18Q96RF0 628 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 TNFRSF13CQ96RJ3 184 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 MYCBPQ99417 103 aaPredicted RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 CNN2Q99439 309 aaKnown RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 TUBA1CQ9BQE3 449 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 RHNO1Q9BSD3 238 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 SCNM1Q9BWG6 230 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 TTTY12Q9BZ98 90 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 FKBP14Q9NWM8 211 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 GRHPRQ9UBQ7 328 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 AASSQ9UDR5 926 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 WARS2Q9UGM6 360 aaKnown RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 B3GALT5Q9Y2C3 310 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 RPH3AQ9Y2J0 694 aaPredicted RBP5.37□□□□□ -1.55
HMGB3-202ENST00000419110 ADAM18Q9Y3Q7 739 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 IER3IP1Q9Y5U9 82 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 COMMD3-BMI1R4GMX3 469 aa5.37□□□□□ -1.55
HMGB3-202ENST00000419110 PHF3Q92576 2039 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 CEP295Q9C0D2 2601 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TRAV17A0A0B4J275 112 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 FAM183AA6NL82 134 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 FAM166BA8MTA8 275 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF99A8MXY4 864 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 B4DXG7 233 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SULT2B1O00204 365 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TFECO14948 347 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 RRP8O43159 456 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 EFSO43281 561 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 EIF1BO60739 113 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PTP4A3O75365 173 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TRAPPC6AO75865 159 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SLC2A10O95528 541 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TXNDC12O95881 172 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PLGP00747 810 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SP1P08047 785 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 TSPAN19P0C672 248 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 HIST1H1CP16403 213 aaKnown RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF24P17028 368 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 JUNBP17275 347 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 WT1P19544 449 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 DCKP27707 260 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SLC15A1P46059 708 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 CAPZA2P47755 286 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ALDH3B2P48448 385 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 DIO1P49895 249 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SLC25A1P53007 311 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 UCNP55089 124 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SH3BGRP55822 239 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ST3GAL4Q11206 333 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ITGADQ13349 1161 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 FHL1Q13642 323 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 RAB39AQ14964 217 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 INPP5JQ15735 1006 aaPredicted RBP5.36□□□□□ -1.55
HMGB3-202ENST00000419110 MESTQ5EB52 335 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 AADACL4Q5VUY2 407 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 SLC25A25Q6KCM7 469 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 BORAQ6PGQ7 559 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 PAQR6Q6TCH4 344 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 ESPNLQ6ZVH7 1005 aa5.36□□□□□ -1.55
HMGB3-202ENST00000419110 H1FNTQ75WM6 255 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms