RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 PAX7P23759 505 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 CRYBA2P53672 197 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 SH3BGRP55822 239 aaPredicted RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 ROR2Q01974 943 aaKnown RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 SPOCK1Q08629 439 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 TBRG1Q3YBR2 411 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 AGAP6Q5VW22 663 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 HMBOX1Q6NT76 420 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 DTX2Q86UW9 622 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 UEVLDQ8IX04 471 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 CIARTQ8N365 385 aaPredicted RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 C10orf53Q8N6V4 93 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 MAGEE2Q8TD90 523 aaPredicted RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 ADAMTS16Q8TE57 1224 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 C10orf82Q8WW14 230 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 BCL2L2Q92843 193 aaPredicted RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 COX4I2Q96KJ9 171 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 ZNF583Q96ND8 569 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 MOGAT1Q96PD6 335 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 ZNF317Q96PQ6 595 aaPredicted RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 PCDHAC1Q9H158 963 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 ALG2Q9H553 416 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 POU2F3Q9UKI9 436 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 FLNAP21333 2647 aaKnown RBP14.41□□□□□ -0.1
LINC00404-201ENST00000418660 MTORP42345 2549 aa14.41□□□□□ -0.1
LINC00404-201ENST00000418660 ACANP16112 2415 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 TRAPPC13A5PLN9 417 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 TRIM64A6NGJ6 449 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 TRIM64BA6NI03 449 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 E7EQL1 145 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 LRRN3E7EW58 273 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 TRAF3IP2O43734 574 aaPredicted RBP14.4□□□□□ -0.1
LINC00404-201ENST00000418660 LYPD3O95274 346 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 HPRP00739 348 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 MT-ATP6P00846 226 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 CD8AP01732 235 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 THY1P04216 161 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 PTNP21246 168 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 UBE2NP61088 152 aaKnown RBP14.4□□□□□ -0.1
LINC00404-201ENST00000418660 PMS2P3Q13401 168 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 ANKRD16Q6P6B7 361 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 TTC33Q6PID6 262 aaPredicted RBP14.4□□□□□ -0.1
LINC00404-201ENST00000418660 TMEM123Q8N131 208 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 GPR137CQ8N3F9 429 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 PIK3C3Q8NEB9 887 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 MPP4Q96JB8 637 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 OR2M2Q96R28 347 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 SMR3AQ99954 134 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 DHRS9Q9BPW9 319 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 FKRPQ9H9S5 495 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 BAG5Q9UL15 447 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 NOX1Q9Y5S8 564 aa14.4□□□□□ -0.1
LINC00404-201ENST00000418660 ZNF469Q96JG9 3925 aaPredicted RBP14.4□□□□□ -0.1
LINC00404-201ENST00000418660 ARPC4-TTLL3A0A0A6YYG9 625 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 FAM171A2A8MVW0 826 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 PLPP3O14495 311 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 IFNA14P01570 189 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 HLA-DOBP13765 273 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 HOXB1P14653 301 aaPredicted RBP14.39□□□□□ -0.11
LINC00404-201ENST00000418660 TTKP33981 857 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 CDKN1AP38936 164 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 PUDPQ08623 228 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 ETFDHQ16134 617 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 NHLRC1Q6VVB1 395 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 B3GLCTQ6Y288 498 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 WDR88Q6ZMY6 472 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 TSPYL5Q86VY4 417 aaPredicted RBP14.39□□□□□ -0.11
LINC00404-201ENST00000418660 RP9Q8TA86 221 aaKnown RBP14.39□□□□□ -0.11
LINC00404-201ENST00000418660 PROX1Q92786 737 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 GPR35Q9HC97 309 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 ARMCX1Q9P291 453 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 SLC7A7Q9UM01 511 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 USP22Q9UPT9 525 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 ARID1AO14497 2285 aa14.39□□□□□ -0.11
LINC00404-201ENST00000418660 A0A096LPE4 126 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 A0A1W2PPZ6 126 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 FAM220BPB1ANY3 271 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 CCDC22O60826 627 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 ARF1P84077 181 aaKnown RBP14.38□□□□□ -0.11
LINC00404-201ENST00000418660 POU3F1Q03052 451 aaPredicted RBP14.38□□□□□ -0.11
LINC00404-201ENST00000418660 ZNF544Q6NX49 715 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 CLEC9AQ6UXN8 241 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 PXKQ7Z7A4 578 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 CARM1Q86X55 608 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 FBXL14Q8N1E6 418 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 MUC15Q8N387 334 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 OR5J2Q8NH18 312 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 RCN3Q96D15 328 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 LRR1Q96L50 414 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 ZNF426Q9BUY5 554 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 SLC19A3Q9BZV2 496 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 NELFAQ9H3P2 528 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 MOV10Q9HCE1 1003 aaKnown RBP14.38□□□□□ -0.11
LINC00404-201ENST00000418660 CBLN4Q9NTU7 201 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 AP3M1Q9Y2T2 418 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 SH3GLB1Q9Y371 365 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 ATP23Q9Y6H3 246 aa14.38□□□□□ -0.11
LINC00404-201ENST00000418660 IGHV1-18A0A0C4DH31 117 aa14.37□□□□□ -0.11
LINC00404-201ENST00000418660 OR6A2O95222 327 aa14.37□□□□□ -0.11
LINC00404-201ENST00000418660 AHCYP23526 432 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms