RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TRBV4-1A0A0J9YWV2 114 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 A0A1W2PRQ8 180 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 C16orf97H3BN30 126 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 GSC2O15499 205 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 ATP5HO75947 161 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 LYZL6O75951 148 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 OR6A2O95222 327 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 IGF2P01344 180 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 PRF1P14222 555 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 PSMB1P20618 241 aaKnown RBP11.02□□□□□ -0.65
SKA1-203ENST00000417656 COX5AP20674 150 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 MAKP20794 623 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 IGHV1-2P23083 117 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 MAGEA2P43356 314 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 GPR4P46093 362 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 PCYT1AP49585 367 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 RASSF2P50749 326 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.65
SKA1-203ENST00000417656 LGALS3BPQ08380 585 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 TRAP1Q12931 704 aaKnown RBP11.02□□□□□ -0.65
SKA1-203ENST00000417656 DGCR6Q14129 220 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 FLOT2Q14254 428 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 TSPO2Q5TGU0 170 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 FBXW9Q5XUX1 488 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 ANKRD34AQ69YU3 496 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 PODNL1Q6PEZ8 512 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 MBOAT2Q6ZWT7 520 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 OR52J3Q8NH60 311 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 SLC7A13Q8TCU3 470 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 KISS1RQ969F8 398 aaPredicted RBP11.02□□□□□ -0.65
SKA1-203ENST00000417656 BPIFA2Q96DR5 249 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 ALKBH3Q96Q83 286 aaPredicted RBP11.02□□□□□ -0.65
SKA1-203ENST00000417656 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 MAGIXQ9H6Y5 334 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 IL1RAPQ9NPH3 570 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 FANCFQ9NPI8 374 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 PARPBPQ9NWS1 579 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 MED29Q9NX70 200 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 MALT1Q9UDY8 824 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 KCNN3Q9UGI6 736 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 SLC7A8Q9UHI5 535 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 POMPQ9Y244 141 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 RCE1Q9Y256 329 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 UNC79Q9P2D8 2635 aa11.02□□□□□ -0.65
SKA1-203ENST00000417656 SETXQ7Z333 2677 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 LOC102725191A0A1B0GVB3 256 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 AKAP8O43823 692 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 GADD45GO95257 159 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 CNOT4O95628 575 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 HIST1H2ABP04908 130 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 SAGP10523 405 aaPredicted RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 IL32P24001 234 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 RRM2P31350 389 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 ERFP50548 548 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 PRKCDQ05655 676 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 RPL18Q07020 188 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 FAPQ12884 760 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 SEC23BQ15437 767 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 FAM98BQ52LJ0 330 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 SFRP5Q5T4F7 317 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 C9orf135Q5VTT2 229 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 CCDC121Q6ZUS5 278 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 HIST3H2AQ7L7L0 130 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 WDFY1Q8IWB7 410 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 ADGRG5Q8IZF4 528 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 OR13C2Q8NGS9 318 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 HIST1H2ACQ93077 130 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 S100PBPQ96BU1 408 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 ZC3HAV1LQ96H79 300 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 FAM46AQ96IP4 442 aaKnown RBP11.01□□□□□ -0.65
SKA1-203ENST00000417656 OR2M2Q96R28 347 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 FUZQ9BT04 418 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 MED18Q9BUE0 208 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 TAS2R5Q9NYW4 299 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 UPB1Q9UBR1 384 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 NOX1Q9Y5S8 564 aa11.01□□□□□ -0.65
SKA1-203ENST00000417656 CRYBG3Q68DQ2 2970 aa11□□□□□ -0.65
SKA1-203ENST00000417656 TRAV27A0A087WT01 109 aa11□□□□□ -0.65
SKA1-203ENST00000417656 DHRS12A0PJE2 317 aa11□□□□□ -0.65
SKA1-203ENST00000417656 AQP12BA6NM10 295 aa11□□□□□ -0.65
SKA1-203ENST00000417656 CYSRT1A8MQ03 144 aa11□□□□□ -0.65
SKA1-203ENST00000417656 EFCAB9A8MZ26 197 aa11□□□□□ -0.65
SKA1-203ENST00000417656 BLOC1S5-TXNDC5H3BN57 136 aa11□□□□□ -0.65
SKA1-203ENST00000417656 RNF13O43567 381 aa11□□□□□ -0.65
SKA1-203ENST00000417656 UPK3AO75631 287 aa11□□□□□ -0.65
SKA1-203ENST00000417656 RAD51DO75771 328 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ZNF432O94892 652 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ITGA5P08648 1049 aa11□□□□□ -0.65
SKA1-203ENST00000417656 IFNGR1P15260 489 aa11□□□□□ -0.65
SKA1-203ENST00000417656 DNAJA1P31689 397 aaKnown RBP11□□□□□ -0.65
SKA1-203ENST00000417656 AQP2P41181 271 aa11□□□□□ -0.65
SKA1-203ENST00000417656 CHRNB3Q05901 458 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ZP4Q12836 540 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ITGADQ13349 1161 aa11□□□□□ -0.65
SKA1-203ENST00000417656 MELKQ14680 651 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms