RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TOM1O60784 492 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TRAPPC6AO75865 159 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 GATBO75879 557 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DCTN3O75935 186 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SNAP29O95721 258 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RAB36O95755 333 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CRYZL1O95825 349 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 IGHG3P01860 377 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 APOC1P02654 83 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 IFNA16P05015 189 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 C2P06681 752 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 HBQ1P09105 142 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 C8orf88P0DMB2 117 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ADORA3P0DMS8 318 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RNH1P13489 461 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 GTF2F2P13984 249 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CD59P13987 128 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 WARSP23381 471 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 FPR3P25089 353 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ITPKBP27987 946 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 NTSP30990 170 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SSTR5P35346 364 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 AVPR1BP47901 424 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CSNK1A1P48729 337 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SRP9P49458 86 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PPOXP50336 477 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 FUT6P51993 359 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PGGT1BP53609 377 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CDH12P55289 794 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RAG2P55895 527 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 AP1S2P56377 157 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CLDN20P56880 219 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 UBE2MP61081 183 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ISL1P61371 349 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RPS18P62269 152 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DHODHQ02127 395 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 OC90Q02509 493 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RGS1Q08116 209 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RIPPLY1Q0D2K3 151 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CNTN1Q12860 1018 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 EIF4EBP2Q13542 120 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PKP1Q13835 747 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TAF1AQ15573 450 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CTF1Q16619 201 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DGUOKQ16854 277 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PGGHGQ32M88 737 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 GTDC1Q4AE62 458 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RFTN2Q52LD8 501 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TP53I3Q53FA7 332 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CYBRD1Q53TN4 286 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RNASE12Q5GAN4 147 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SOHLH1Q5JUK2 328 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TIMM23BQ5SRD1 257 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 C1orf220Q5T0J3 134 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 FRMPD2BQ6IN97 320 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TYW3Q6IPR3 259 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 NIPAL1Q6NVV3 410 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 EMBQ6PCB8 327 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DHRS11Q6UWP2 260 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF836Q6ZNA1 936 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 Q6ZRG5 221 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TMEM179Q6ZVK1 233 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 Q71RC1 249 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SHFQ7M4L6 423 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TFAP2DQ7Z6R9 452 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CMC1Q7Z7K0 106 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 LYG2Q86SG7 212 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PIM3Q86V86 326 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PHF13Q86YI8 300 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 APOBEC3FQ8IUX4 373 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 LACC1Q8IV20 430 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 FAM71AQ8IYT1 594 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CMTM1Q8IZ96 169 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PUSL1Q8N0Z8 303 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 LGI3Q8N145 548 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 C2orf73Q8N5S3 287 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 IQCF1Q8N6M8 205 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ZSCAN4Q8NAM6 433 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 OR4K2Q8NGD2 314 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 OR5L1Q8NGL2 311 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 OR13J1Q8NGT2 312 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 OR11L1Q8NGX0 322 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 COQ8AQ8NI60 647 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 RNASEH2CQ8TDP1 164 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 BAALCQ8WXS3 180 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DNASE2BQ8WZ79 361 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 C18orf25Q96B23 403 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TADA1Q96BN2 335 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TLCD1Q96CP7 247 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 YIPF6Q96EC8 236 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ZBED6CLQ96FA7 236 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SERPINB12Q96P63 405 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 QKIQ96PU8 341 aaKnown RBP eCLIP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PSMB7Q99436 277 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CDCA3Q99618 268 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PHB2Q99623 299 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 URM1Q9BTM9 101 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TMED9Q9BVK6 235 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ALOXE3Q9BYJ1 711 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms