RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 KRT75O95678 551 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 SERPINE1P05121 402 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 ZNF35P13682 527 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 PRG2P13727 222 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 COL8A2P25067 703 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 GLRXP35754 106 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 GPR6P46095 362 aaPredicted RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 RPL14P50914 215 aaKnown RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 ARFIP2P53365 341 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 HILS1P60008 231 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 ABCE1P61221 599 aaKnown RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 UFM1P61960 85 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 MRPS11P82912 194 aaKnown RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 REP15Q6BDI9 236 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 CARM1Q86X55 608 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 TMEM123Q8N131 208 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 GPR137CQ8N3F9 429 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 PIK3C3Q8NEB9 887 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 RDH5Q92781 318 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 SLC25A36Q96CQ1 311 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
DDX56-202ENST00000415758 P2RX2Q9UBL9 471 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 HAO1Q9UJM8 370 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 PCDHB10Q9UN67 800 aa13.24□□□□□ -0.29
DDX56-202ENST00000415758 OR2T1O43869 369 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 HPXP02790 462 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 GSNP06396 782 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 GAAP10253 952 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 ZNF14P17017 642 aaPredicted RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 NCF2P19878 526 aaPredicted RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 IL12AP29459 219 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 RPS5P46782 204 aaKnown RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 CRISP3P54108 245 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 LMO4P61968 165 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 ACTG1P63261 375 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 LARS2Q15031 903 aaKnown RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 C6orf89Q6UWU4 347 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 ZNF627Q7L945 461 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 KIRREL3Q8IZU9 778 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 TEX29Q8N6K0 151 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 PNPT1Q8TCS8 783 aaKnown RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 SLC38A5Q8WUX1 472 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 SLC35B4Q969S0 331 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 KTI12Q96EK9 354 aaPredicted RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 LRRC37BQ96QE4 947 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 OR2M2Q96R28 347 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 OR52E6Q96RD3 313 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 SORT1Q99523 831 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 SPATA9Q9BWV2 254 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 ARMC7Q9H6L4 198 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 MEAF6Q9HAF1 191 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
DDX56-202ENST00000415758 ZNF443Q9Y2A4 671 aaPredicted RBP13.23□□□□□ -0.29
DDX56-202ENST00000415758 TRIM77I1YAP6 450 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 BIRC5O15392 142 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 ALDOCP09972 364 aaKnown RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 SAGP10523 405 aaPredicted RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 GTF2E2P29084 291 aaKnown RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 CHI3L2Q15782 390 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 FXNQ16595 210 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 GSG1Q2KHT4 349 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 ATG16L1Q676U5 607 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 SHQ1Q6PI26 577 aaKnown RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 C5orf46Q6UWT4 87 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 PEG10Q86TG7 708 aaKnown RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 SERPINA11Q86U17 422 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 OR51F2Q8NH61 342 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 LRR1Q96L50 414 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 DENND2DQ9H6A0 471 aaPredicted RBP13.22□□□□□ -0.29
DDX56-202ENST00000415758 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 SEC14L4Q9UDX3 406 aa13.22□□□□□ -0.29
DDX56-202ENST00000415758 TRAV20A0A0B4J274 112 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 A0A0G2JPF8 293 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 HNRNPCL3B7ZW38 293 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 AIM2O14862 343 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 WNT9BO14905 357 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 KCNAB3O43448 404 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 TRAF3IP2O43734 574 aaPredicted RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 AKAP8O43823 692 aaKnown RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 HLA-HP01893 362 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 BCHEP06276 602 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 HNRNPCL4P0DMR1 293 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 CAPZA2P47755 286 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 LIMS1P48059 325 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 SLC1A6P48664 564 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 SEC24CP53992 1094 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 C1DQ13901 141 aaKnown RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 PHYHD1Q5SRE7 291 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 FAM69AQ5T7M9 428 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 NHLRC1Q6VVB1 395 aa13.21□□□□□ -0.29
DDX56-202ENST00000415758 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 H1FNTQ75WM6 255 aaPredicted RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 NET1Q7Z628 596 aaPredicted RBP13.21□□□□□ -0.29
DDX56-202ENST00000415758 C20orf196Q8IYI0 205 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms