RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 POM121Q96HA1 1249 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 BCL2L10Q9HD36 194 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 CALML5Q9NZT1 146 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 SCOCQ9UIL1 159 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 NAV3Q8IVL0 2385 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 SMAD9O15198 467 aaKnown RBP18.13■□□□□ 0.49
PTPRU-203ENST00000415600 MFN2O95140 757 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 PMS2P2O95744 297 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 IL7RP16871 459 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 CD247P20963 164 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 ARHGDIAP52565 204 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 SYPL1Q16563 259 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 PRAMEF8Q5VWM4 474 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 PRAMEF7Q5VXH5 474 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 CLEC9AQ6UXN8 241 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 TSEN54Q7Z6J9 526 aaKnown RBP18.13■□□□□ 0.49
PTPRU-203ENST00000415600 PEX5LQ8IYB4 626 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF440Q8IYI8 595 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 DHRSXQ8N5I4 330 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 BBS10Q8TAM1 723 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 RASSF5Q8WWW0 418 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 DDIT4LQ96D03 193 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF347Q96SE7 839 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF607Q96SK3 696 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 TMEM204Q9BSN7 226 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 GSX1Q9H4S2 264 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-203ENST00000415600 CTPS2Q9NRF8 586 aa18.13■□□□□ 0.49
PTPRU-203ENST00000415600 HEATR5AQ86XA9 2040 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 CENPVL1A0A0U1RR11 272 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 H0YAE9 185 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 DIRAS1O95057 198 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 DBIP07108 87 aaKnown RBP18.12■□□□□ 0.49
PTPRU-203ENST00000415600 THRBP10828 461 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 ITGA2P17301 1181 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 CRISP3P54108 245 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 EPS8Q12929 822 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 TAB1Q15750 504 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 ZSWIM7Q19AV6 140 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 ADAM5Q6NVV9 412 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 TMEM154Q6P9G4 183 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 OLIG3Q7RTU3 272 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 KRTAP1-3Q8IUG1 177 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 HS3ST5Q8IZT8 346 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 AKAP1Q92667 903 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPRU-203ENST00000415600 Q96MF0 132 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 REEP1Q9H902 201 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 NDUFAF4Q9P032 175 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 U3KQV3 271 aa18.12■□□□□ 0.49
PTPRU-203ENST00000415600 VPS13CQ709C8 3753 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 AGAP5A6NIR3 686 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 EIF1BO60739 113 aaKnown RBP18.11■□□□□ 0.49
PTPRU-203ENST00000415600 SNAP29O95721 258 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 PAX1P15863 534 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 MYF6P23409 242 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 CAPGP40121 348 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 IDH2P48735 452 aaKnown RBP18.11■□□□□ 0.49
PTPRU-203ENST00000415600 PTH2RP49190 550 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 POLR2HP52434 150 aaKnown RBP18.11■□□□□ 0.49
PTPRU-203ENST00000415600 FUT5Q11128 374 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 PPP1R8Q12972 351 aaKnown RBP18.11■□□□□ 0.49
PTPRU-203ENST00000415600 GK3PQ14409 553 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 SMYD1Q8NB12 490 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 FBXW5Q969U6 566 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF300Q96RE9 604 aaPredicted RBP18.11■□□□□ 0.49
PTPRU-203ENST00000415600 ARMC7Q9H6L4 198 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 SMURF2Q9HAU4 748 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 TRAPPC4Q9Y296 219 aa18.11■□□□□ 0.49
PTPRU-203ENST00000415600 NOSIPQ9Y314 301 aaKnown RBP18.11■□□□□ 0.49
PTPRU-203ENST00000415600 IGKV3D-15A0A087WSY6 115 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 SERPINB7O75635 380 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 ETS2P15036 469 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 GTF2A1P52655 376 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-203ENST00000415600 RPS4XP62701 263 aaKnown RBP18.1■□□□□ 0.49
PTPRU-203ENST00000415600 ADARB1P78563 741 aaKnown RBP18.1■□□□□ 0.49
PTPRU-203ENST00000415600 STK11Q15831 433 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 DUSP7Q16829 419 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 ABLIM2Q6H8Q1 611 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 KRT73Q86Y46 540 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 UBE2J2Q8N2K1 259 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 APH1AQ96BI3 265 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF524Q96C55 264 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 EPYCQ99645 322 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 NAA11Q9BSU3 229 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-203ENST00000415600 SAMHD1Q9Y3Z3 626 aaKnown RBP18.1■□□□□ 0.49
PTPRU-203ENST00000415600 PCDHGB5Q9Y5G0 923 aa18.1■□□□□ 0.49
PTPRU-203ENST00000415600 A0A0G2JPF8 293 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 HNRNPCL2B2RXH8 293 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF814B7Z6K7 855 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 HNRNPCL3B7ZW38 293 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 FAAHO00519 579 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 ZNF208O43345 1280 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 HNRNPCL4P0DMR1 293 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 TNFRSF1BP20333 461 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 SLC1A3P43003 542 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 OR1E2P47887 323 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 ATP5J2P56134 94 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 OR2B6P58173 313 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 SLC35A1P78382 337 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 MYBPC1Q00872 1141 aa18.09■□□□□ 0.49
PTPRU-203ENST00000415600 LTBQ06643 244 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms