RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SCGB2A2Q13296 93 aa2.47□□□□□ -2.01
ATG4C-204ENST00000414558 KCNIP4Q6PIL6 250 aa2.47□□□□□ -2.01
ATG4C-204ENST00000414558 SLC35F2Q8IXU6 374 aa2.47□□□□□ -2.01
ATG4C-204ENST00000414558 RAB34Q9BZG1 259 aa2.47□□□□□ -2.01
ATG4C-204ENST00000414558 HOXC10Q9NYD6 342 aa2.47□□□□□ -2.01
ATG4C-204ENST00000414558 RFNGQ9Y644 331 aa2.47□□□□□ -2.01
ATG4C-204ENST00000414558 SF3B1O75533 1304 aaKnown RBP eCLIP2.46□□□□□ -2.022e-7■■■■■ 129.2
ATG4C-204ENST00000414558 MN1Q10571 1320 aaPredicted RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 FANCIQ9NVI1 1328 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 A0A087WZY1 265 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 INS-IGF2F8WCM5 200 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 RRP8O43159 456 aaKnown RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 MFN2O95140 757 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 CSF3P09919 207 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 UBTFL1P0CB47 393 aaPredicted RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 TCN2P20062 427 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 FGF8P55075 233 aaPredicted RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 ACVR1Q04771 509 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 BLOC1S2Q6QNY1 142 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 GET4Q7L5D6 327 aaPredicted RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 ZNF547Q8IVP9 402 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 ZDHHC21Q8IVQ6 265 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 CCDC65Q8IXS2 484 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 VN1R2Q8NFZ6 395 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 RGP1Q92546 391 aaPredicted RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 CAPS2Q9BXY5 557 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 KRT23Q9C075 422 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 C1orf21Q9H246 121 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 ZNF355PQ9NSJ1 428 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 XCL2Q9UBD3 114 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 CD84Q9UIB8 345 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 HOOK1Q9UJC3 728 aaKnown RBP2.46□□□□□ -2.02
ATG4C-204ENST00000414558 MFHAS1Q9Y4C4 1052 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 U3KQV3 271 aa2.46□□□□□ -2.02
ATG4C-204ENST00000414558 CCDC182A6NF36 153 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 SRP72O76094 671 aaKnown RBP2.45□□□□□ -2.02
ATG4C-204ENST00000414558 MPZL1O95297 269 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 AP2A1O95782 977 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 IGKV1D-16P01601 117 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 ADRA2AP08913 450 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 POLR2MP0CAP2 368 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 SMIM10L1P0DMW3 83 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 PNMTP11086 282 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 GAP43P17677 238 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 PCMT1P22061 227 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 GCAP28676 217 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 IL12AP29459 219 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 DDOSTP39656 456 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 FZD2Q14332 565 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 MESDQ14696 234 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 SLC15A2Q16348 729 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 TTLL9Q3SXZ7 439 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 ZBED5Q49AG3 693 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 CARD16Q5EG05 197 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 FGF14Q92915 247 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 EFHD2Q96C19 240 aaPredicted RBP2.45□□□□□ -2.02
ATG4C-204ENST00000414558 PDXPQ96GD0 296 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 SMIM10Q96HG1 83 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 C4orf36Q96KX1 117 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 OMDQ99983 421 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 DBNDD1Q9H9R9 158 aa2.45□□□□□ -2.02
ATG4C-204ENST00000414558 THUMPD1Q9NXG2 353 aaKnown RBP2.45□□□□□ -2.02
ATG4C-204ENST00000414558 LRP5LA4QPB2 252 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 CLDN3O15551 220 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 TM7SF2O76062 418 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 MMP11P24347 488 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 VGLL4Q14135 290 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 TATDN3Q17R31 274 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 C1orf94Q6P1W5 598 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 ISLR2Q6UXK2 745 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 THOC6Q86W42 341 aaKnown RBP2.44□□□□□ -2.02
ATG4C-204ENST00000414558 CCDC50Q8IVM0 306 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 ZNF679Q8IYX0 411 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 FADS6Q8N9I5 356 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 FNDC5Q8NAU1 212 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 OR10G4Q8NGN3 311 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 OR1F12Q8NHA8 337 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 AMDHD1Q96NU7 426 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 GBA3Q9H227 469 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 LINC00597Q9H2U6 94 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 CALYQ9NYX4 217 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 TMCO1Q9UM00 188 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 OR10H1Q9Y4A9 318 aa2.44□□□□□ -2.02
ATG4C-204ENST00000414558 F11RQ9Y624 299 aaKnown RBP2.44□□□□□ -2.02
ATG4C-204ENST00000414558 PHF3Q92576 2039 aaKnown RBP2.44□□□□□ -2.02
ATG4C-204ENST00000414558 IGLV3-12A0A075B6K2 115 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 BTN3A3O00478 584 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 MAPK13O15264 365 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 RBFOX2O43251 390 aaKnown RBP eCLIP2.43□□□□□ -2.02
ATG4C-204ENST00000414558 OXA1LQ15070 435 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 BHLHA15Q7RTS1 189 aaPredicted RBP2.43□□□□□ -2.02
ATG4C-204ENST00000414558 GRAMD2AQ8IUY3 354 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 LRRC58Q96CX6 371 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 RNF2Q99496 336 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 ZNF416Q9BWM5 594 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 PLA2G12AQ9BZM1 189 aa2.43□□□□□ -2.02
ATG4C-204ENST00000414558 SPATA7Q9P0W8 599 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms