RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TSPAN9O75954 239 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 PDE9AO76083 593 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CLDN14O95500 239 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 PDYNP01213 254 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 MT-ND2P03891 347 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 P04436 131 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CDK1P06493 297 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 LINC00032P0C843 101 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CCL3P10147 92 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 PIPP12273 146 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SPNP16150 400 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 NCK1P16333 377 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 NAGAP17050 411 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 GABRB1P18505 474 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 AGAP20933 346 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 NT5EP21589 574 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 PRPH2P23942 346 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 PTPN6P29350 595 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 GALNSP34059 522 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SOX6P35712 828 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 NR4A2P43354 598 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 OR3A3P47888 321 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 DNASE1L1P49184 302 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 RGS6P49758 472 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CLK1P49759 484 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 GZMKP49863 264 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 DAPP51397 102 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 BLVRAP53004 296 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 MAPK12P53778 367 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 FOXA1P55317 472 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SLC37A1P57057 533 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 RAB25P57735 213 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 VEZF1Q14119 521 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 EBPQ15125 230 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF630Q2M218 657 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF791Q3KP31 576 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ATP6AP1LQ52LC2 224 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SPANXN2Q5MJ10 180 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 RSBN1Q5VWQ0 802 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SLC22A10Q63ZE4 541 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TMEM211Q6ICI0 200 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 OR4F3Q6IEY1 312 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 OR2T5Q6IEZ7 315 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ARHGAP11AQ6P4F7 1023 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ERICH5Q6P6B1 374 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 METAP1DQ6UB28 335 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 C3P1Q6ZMU1 363 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF782Q6ZMW2 699 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TMEM179BQ7Z7N9 219 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SERPINA11Q86U17 422 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 KRT73Q86Y46 540 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 MCEMP1Q8IX19 187 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 C9orf40Q8IXQ3 194 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 DND1Q8IYX4 353 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CLIP4Q8N3C7 705 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 FAM109AQ8N4B1 249 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TMEM251Q8N6I4 163 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 LSMEM1Q8N8F7 131 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 GDPD1Q8N9F7 314 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 OR4K14Q8NGD5 310 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 OR52N2Q8NGI0 321 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 OR2T29Q8NH02 315 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SLC7A6Q92536 515 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SPACA9Q96E40 222 aaPredicted RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SLC47A1Q96FL8 570 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 METTL2AQ96IZ6 378 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 PPP3R2Q96LZ3 170 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 COL21A1Q96P44 957 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TRNT1Q96Q11 434 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 DMRTA2Q96SC8 542 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 HBEGFQ99075 208 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 EPYCQ99645 322 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 FOXB1Q99853 325 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SOSTQ9BQB4 213 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 VKORC1Q9BQB6 163 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SLC30A2Q9BRI3 323 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TMEM246Q9BRR3 403 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TAPBPLQ9BX59 468 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TTTY12Q9BZ98 90 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 WWTR1Q9GZV5 400 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SERHL2Q9H4I8 314 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 BRF2Q9HAW0 419 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 IL1RL2Q9HB29 575 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SMURF1Q9HCE7 757 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CHST11Q9NPF2 352 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ABCB10Q9NRK6 738 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 FARSBQ9NSD9 589 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 C1orf109Q9NX04 203 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 TAS2R9Q9NYW1 312 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SEC14L4Q9UDX3 406 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 NUP50Q9UKX7 468 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CBLCQ9ULV8 474 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 SAMD4AQ9UPU9 718 aaKnown RBP4.79□□□□□ -1.64
LINC00342-201ENST00000412393 MED12Q93074 2177 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 DOCK7Q96N67 2140 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 ITPR2Q14571 2701 aa4.79□□□□□ -1.64
LINC00342-201ENST00000412393 CENPEQ02224 2701 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms