RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FABP5Q01469 135 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 EGR4Q05215 589 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 C17orf67Q0P5P2 114 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 MRPL28Q13084 256 aaKnown RBP6.8□□□□□ -1.32
CXCR4-202ENST00000409817 ATP1A4Q13733 1029 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 ZNF528Q3MIS6 628 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 CCDC58Q4VC31 144 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 TRIM61Q5EBN2 209 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 DDI2Q5TDH0 399 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 PAPD4Q6PIY7 484 aaKnown RBP6.8□□□□□ -1.32
CXCR4-202ENST00000409817 PAMR1Q6UXH9 720 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 PLEKHG7Q6ZR37 379 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 MAMDC2Q7Z304 686 aaPredicted RBP6.8□□□□□ -1.32
CXCR4-202ENST00000409817 FAM122BQ7Z309 247 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 NANOGNBQ7Z5D8 188 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 CPEB2Q7Z5Q1 589 aaKnown RBP6.8□□□□□ -1.32
CXCR4-202ENST00000409817 MARCH3Q86UD3 253 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 CDH24Q86UP0 819 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 PRR22Q8IZ63 422 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 C10orf53Q8N6V4 93 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 LRRC17Q8N6Y2 441 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 TMEM99Q8N816 258 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 LRRC75AQ8NAA5 344 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 CYB561A3Q8NBI2 242 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 SLC38A9Q8NBW4 561 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 SDR9C7Q8NEX9 313 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 OR4K13Q8NH42 304 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 NEIL3Q8TAT5 605 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 ST8SIA1Q92185 356 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 TMEM203Q969S6 136 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 SNX18Q96RF0 628 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 MNTQ99583 582 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 KATNB1Q9BVA0 655 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 BARHL1Q9BZE3 327 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 CPNE5Q9HCH3 593 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 ETAA1Q9NY74 926 aa6.8□□□□□ -1.32
CXCR4-202ENST00000409817 A8MVM7 634 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CASKO14936 926 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 WIPF1O43516 503 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TRIM3O75382 744 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ZFAND5O76080 213 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 GLCEO94923 617 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CD63P08962 238 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 SPI1P17947 270 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PTBP1P26599 531 aaKnown RBP eCLIP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TNFSF8P32971 234 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 SDC2P34741 201 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CD79BP40259 229 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ZFP36L1Q07352 338 aaKnown RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CDC20Q12834 499 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 MFSD13AQ14CX5 517 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PHF19Q5T6S3 580 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 FAM69AQ5T7M9 428 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 FAAH2Q6GMR7 532 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 MZT2AQ6P582 158 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 KCTD20Q7Z5Y7 419 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TPRA1Q86W33 373 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 LYSMD2Q8IV50 215 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ARMC10Q8N2F6 343 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TEX19Q8NA77 164 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 SETD6Q8TBK2 473 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 RNF138Q8WVD3 245 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ACOT12Q8WYK0 555 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PHYHIPQ92561 330 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 KIAA1143Q96AT1 154 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TIMP4Q99727 224 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CRB3Q9BUF7 120 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 GP6Q9HCN6 339 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 SDHAF3Q9NRP4 125 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TAS2R10Q9NYW0 307 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CMAHPQ9Y471 501 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PCDHGB2Q9Y5G2 931 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ASCC3Q8N3C0 2202 aaKnown RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ARPC4-TTLL3A0A0A6YYG9 625 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 A0A1W2PQL4 384 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ANKUB1A6NFN9 424 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 LRRN3E7EW58 273 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 BLOC1S5-TXNDC5H3BN57 136 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 AGRPO00253 132 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CTDSP2O14595 271 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 RGS5O15539 181 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PRKNO60260 465 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 NPIPB7O75200 414 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 NUDT14O95848 222 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PTTG1O95997 202 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 BGLAPP02818 100 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 KLK3P07288 261 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 TGM1P22735 817 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 AQP2P41181 271 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 GBX2P52951 348 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-202ENST00000409817 BLVRAP53004 296 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 CTXN1P60606 82 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 PPP3R1P63098 170 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ERVK-25P63136 954 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 IFITM3Q01628 133 aa6.79□□□□□ -1.32
CXCR4-202ENST00000409817 ZNF85Q03923 595 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms