RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PEX11AO75192 247 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 DCTN3O75935 186 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 KRT33AO76009 404 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 SCELO95171 688 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 CPNE6O95741 557 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 RPLP0P05388 317 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 SMIM18P0DKX4 95 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 BCKDHAP12694 445 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 CD1EP15812 388 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 CDH3P22223 829 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TIA1P31483 386 aaKnown RBP eCLIP3.68□□□□□ -1.826e-7■■□□□ 13.4
CLK1-203ENST00000409769 PCGF2P35227 344 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 PTGER4P35408 488 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TSFMP43897 325 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 DUSP3P51452 185 aaPredicted RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 ATXN3P54252 364 aaPredicted RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 DIO3P55073 304 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 RPL38P63173 70 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 IRX1P78414 480 aaPredicted RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 CCL7P80098 99 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 ZFP36L1Q07352 338 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 KLC1Q07866 573 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 SQLEQ14534 574 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TMEM187Q14656 261 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 RFTN2Q52LD8 501 aaPredicted RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 SPIN4Q56A73 249 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 KHDRBS2Q5VWX1 349 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 FRMPD2BQ6IN97 320 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 PWWP2BQ6NUJ5 590 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 IRGCQ6NXR0 463 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 FAM92BQ6ZTR7 304 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TRPM8Q7Z2W7 1104 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 SPATA19Q7Z5L4 167 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 ADCK2Q7Z695 626 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 ASPGQ86U10 573 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 FUNDC1Q8IVP5 155 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 NAXDQ8IW45 347 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 Q8N9G6 341 aaPredicted RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 THAP8Q8NA92 274 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TRPV3Q8NET8 790 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 OR2L5Q8NG80 312 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 OR11H4Q8NGC9 324 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 OR4D9Q8NGE8 314 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 MOB3AQ96BX8 217 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 ERP27Q96DN0 273 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 MS4A6EQ96DS6 147 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 CNDP2Q96KP4 475 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 POM121L2Q96KW2 1035 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 LINC00479Q96M42 142 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 RILPQ96NA2 401 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 CATSPER2Q96P56 530 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TGM7Q96PF1 710 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 SERPINI1Q99574 410 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 CCDC3Q9BQI4 270 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 OR51B5Q9H339 312 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 LRTM1Q9HBL6 345 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 TMEM9BQ9NQ34 198 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 P4HTMQ9NXG6 502 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 ARMCX1Q9P291 453 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 VPS29Q9UBQ0 182 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 MRPS28Q9Y2Q9 187 aaKnown RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 POLR3HQ9Y535 204 aaPredicted RBP3.68□□□□□ -1.82
CLK1-203ENST00000409769 SPEGQ15772 3267 aa3.68□□□□□ -1.82
CLK1-203ENST00000409769 IGHV5-10-1A0A0J9YXX1 117 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SRPX2O60687 465 aaPredicted RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 TBX19O60806 448 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SEC22BO75396 215 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 LDOC1O95751 146 aaPredicted RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 SLC35G6P0C7Q6 338 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SAGP10523 405 aaPredicted RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 PRPS2P11908 318 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 IDO1P14902 403 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 FOLR1P15328 257 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 NELFEP18615 380 aaKnown RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 SDC1P18827 310 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 ZNF10P21506 573 aaPredicted RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 GPX3P22352 226 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 JAK1P23458 1154 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 PIK3R1P27986 724 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 IL12AP29459 219 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 PRDX6P30041 224 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 CAPZA2P47755 286 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 CLDN8P56748 225 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 STXBP1P61764 594 aaKnown RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 ZNF415Q09FC8 603 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 BNIP1Q12981 228 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 ILKQ13418 452 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 TRA2AQ13595 282 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLK1-203ENST00000409769 DDX39BQ13838 428 aaKnown RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 HERC3Q15034 1050 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 IMPG1Q17R60 797 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 HKDC1Q2TB90 917 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SLC35D3Q5M8T2 416 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 ARMC4Q5T2S8 1044 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 IL23RQ5VWK5 629 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 OR4C11Q6IEV9 310 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 NOXRED1Q6NXP6 359 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 BHLHB9Q6PI77 547 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 ASCL5Q7RTU5 278 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms