RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 OR4F15Q8NGB8 312 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 OR51G2Q8NGK0 314 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 OR52I1Q8NGK6 324 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SLC25A43Q8WUT9 341 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 TMEM80Q96HE8 168 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SFXN2Q96NB2 322 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SIGLEC11Q96RL6 698 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 TTTY12Q9BZ98 90 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ACOT13Q9NPJ3 140 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ALKBH4Q9NXW9 302 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 KLHL21Q9UJP4 597 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 WASF3Q9UPY6 502 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 KLF13Q9Y2Y9 288 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 CORINQ9Y5Q5 1042 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 OR6C68A6NDL8 312 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 FAM171A2A8MVW0 826 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MS4A18H0YCH9 400 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 H3BSA7 217 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SULT2B1O00204 365 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SEC14L5O43304 696 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MRPL3P09001 348 aaKnown RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 PIPP12273 146 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF17P17021 662 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 KLK2P20151 261 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 PSMB9P28065 219 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 B3GALT5-AS1P59052 145 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MFSD13AQ14CX5 517 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ACKR1Q16570 336 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MS4A18Q3C1V0 323 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MESTQ5EB52 335 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF766Q5HY98 468 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 MEPCEQ7L2J0 689 aaKnown RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 NPEPL1Q8NDH3 523 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 RORBQ92753 470 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 HAS2Q92819 552 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 RERGLQ9H628 205 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF703Q9H7S9 590 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 CHST11Q9NPF2 352 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 RPRD1BQ9NQG5 326 aaKnown RBP11.19□□□□□ -0.62
CHMP3-204ENST00000409727 B4GALT7Q9UBV7 327 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 CLEC2DQ9UHP7 191 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 SLC6A5Q9Y345 797 aa11.19□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF99A8MXY4 864 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-204ENST00000409727 KLRC4-KLRK1H3BQV0 150 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 TNFSF11O14788 317 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 IDH3BO43837 385 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 RAB36O95755 333 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 PTHP01270 115 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 ACVR1BP36896 505 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 MAGEA5P43359 124 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 STARP49675 285 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 POU3F1Q03052 451 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-204ENST00000409727 CRTC2Q53ET0 693 aaPredicted RBP11.18□□□□□ -0.62
CHMP3-204ENST00000409727 KLHL22Q53GT1 634 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 PAQR6Q6TCH4 344 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 OR6S1Q8NH40 331 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 SNIP1Q8TAD8 396 aaKnown RBP11.18□□□□□ -0.62
CHMP3-204ENST00000409727 MUL1Q969V5 352 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 TSSK2Q96PF2 358 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 ASB6Q9NWX5 421 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
CHMP3-204ENST00000409727 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 HDGFL3Q9Y3E1 203 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 FREM3P0C091 2139 aa11.18□□□□□ -0.62
CHMP3-204ENST00000409727 LOC400499M0QZD8 3231 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 IGHV3-15A0A0B4J1V0 119 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 A0A1W2PRG6 482 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 CCDC182A6NF36 153 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 ZNF814B7Z6K7 855 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 MRPS14O60783 128 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 HSMCR30P0CW71 290 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 IFNGR1P15260 489 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 JUNBP17275 347 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 CD97P48960 835 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 GP2P55259 537 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 CLDN20P56880 219 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 RAB40BQ12829 278 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 MED22Q15528 200 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 GPR107Q5VW38 600 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TMPPEQ6ZT21 453 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SCAIQ8N9R8 606 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 OR6K6Q8NGW6 343 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SMAP2Q8WU79 429 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 ZNRF4Q8WWF5 429 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 KISS1RQ969F8 398 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 ZMYND19Q96E35 227 aaPredicted RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TBX5Q99593 518 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 TEAD3Q99594 435 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SRA1Q9HD15 236 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 MED29Q9NX70 200 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 PCDHGB1Q9Y5G3 927 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 SMIM31A0A1B0GVY4 71 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 EIF1AYO14602 144 aaKnown RBP11.17□□□□□ -0.62
CHMP3-204ENST00000409727 XKRYO14609 159 aa11.17□□□□□ -0.62
CHMP3-204ENST00000409727 RAMP1O60894 148 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms