RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 TESMINQ9Y4I5 508 aa17.96■□□□□ 0.47
PTCD3-202ENST00000409326 C16orf97H3BN30 126 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 TRAF3IP2O43734 574 aaPredicted RBP17.95■□□□□ 0.46
PTCD3-202ENST00000409326 OR6A2O95222 327 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 GADD45GO95257 159 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 POU3F1Q03052 451 aaPredicted RBP17.95■□□□□ 0.46
PTCD3-202ENST00000409326 ZP4Q12836 540 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 FBXW9Q5XUX1 488 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 TBPL2Q6SJ96 375 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 STAC2Q6ZMT1 411 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 ASRGL1Q7L266 308 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 PXKQ7Z7A4 578 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 FUZQ9BT04 418 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 TAS2R5Q9NYW4 299 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.95■□□□□ 0.46
PTCD3-202ENST00000409326 MALT1Q9UDY8 824 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 RCE1Q9Y256 329 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 NOX1Q9Y5S8 564 aa17.95■□□□□ 0.46
PTCD3-202ENST00000409326 TRBV4-1A0A0J9YWV2 114 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 TUBAL3A6NHL2 446 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 C11orf98E9PRG8 122 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 ADAP00813 363 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 IGHV3-9P01782 118 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 TSPAN19P0C672 248 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 RAP2AP10114 183 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 HLA-DOBP13765 273 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 PSMB1P20618 241 aaKnown RBP17.94■□□□□ 0.46
PTCD3-202ENST00000409326 AHCYP23526 432 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 RRM2P31350 389 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 KIR2DL3P43628 341 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 CLDN17P56750 224 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 P2RY6Q15077 328 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 NIPAL3Q6P499 406 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 NHLRC1Q6VVB1 395 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 RRM2BQ7LG56 351 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 CXorf67Q86X51 503 aaPredicted RBP17.94■□□□□ 0.46
PTCD3-202ENST00000409326 ADGRG5Q8IZF4 528 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 OR52J3Q8NH60 311 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 MARVELD3Q96A59 401 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 SLCO5A1Q9H2Y9 848 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 KCNN3Q9UGI6 736 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 GPR52Q9Y2T5 361 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 CELSR2Q9HCU4 2923 aa17.94■□□□□ 0.46
PTCD3-202ENST00000409326 CENPEQ02224 2701 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 DHRS12A0PJE2 317 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 AKAP8O43823 692 aaKnown RBP17.93■□□□□ 0.46
PTCD3-202ENST00000409326 HOXB6P17509 224 aaKnown RBP17.93■□□□□ 0.46
PTCD3-202ENST00000409326 COX5AP20674 150 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 MAKP20794 623 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 SELENOPP49908 381 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 RPL18Q07020 188 aaKnown RBP17.93■□□□□ 0.46
PTCD3-202ENST00000409326 ITGADQ13349 1161 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 SEC23BQ15437 767 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 SFRP5Q5T4F7 317 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 TSPO2Q5TGU0 170 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 SPATA24Q86W54 205 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 CDK20Q8IZL9 346 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 UBE2J2Q8N2K1 259 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 POMGNT2Q8NAT1 580 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 ANKK1Q8NFD2 765 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 OR10A4Q9H209 315 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 ASB6Q9NWX5 421 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 CRIM1Q9NZV1 1036 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 TMEM5Q9Y2B1 443 aa17.93■□□□□ 0.46
PTCD3-202ENST00000409326 UNC79Q9P2D8 2635 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 TCRBV3S1A0A5B6 114 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 SH3PXD2BA1X283 911 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 OR6C65A6NJZ3 312 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 EFCAB9A8MZ26 197 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 BLOC1S5-TXNDC5H3BN57 136 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 RNF13O43567 381 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 KRT36O76013 467 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 ZNF432O94892 652 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 SAGP10523 405 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-202ENST00000409326 IGHV1-2P23083 117 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 TMPRSS11FQ6ZWK6 438 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 OR4K5Q8NGD3 323 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 LINC01560Q8TB33 94 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 FAM222BQ8WU58 562 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 CANT1Q8WVQ1 401 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 KISS1RQ969F8 398 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-202ENST00000409326 DACH2Q96NX9 599 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 HDHD5Q9BXW7 423 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 KRCC1Q9NPI7 259 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-202ENST00000409326 SLC7A10Q9NS82 523 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 UPB1Q9UBR1 384 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 NDRG3Q9UGV2 375 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 AURKCQ9UQB9 309 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 HIF3AQ9Y2N7 669 aa17.92■□□□□ 0.46
PTCD3-202ENST00000409326 DCHS2Q6V1P9 2916 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 SH3D21A4FU49 640 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 PDLIM1O00151 329 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 SERPINI2O75830 405 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 AQP2P41181 271 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 GPR4P46093 362 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 OMPP47874 163 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 SLC9A3P48764 834 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 RPS4XP62701 263 aaKnown RBP17.91■□□□□ 0.46
PTCD3-202ENST00000409326 FAPQ12884 760 aa17.91■□□□□ 0.46
PTCD3-202ENST00000409326 MEX3DQ86XN8 651 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms