RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 VWFP04275 2813 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 HMGN4O00479 90 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 DEAF1O75398 565 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-203ENST00000409225 C1QCP02747 245 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF35P13682 527 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 IL7RP16871 459 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF43P17038 809 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 MAGEB1P43366 347 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 CLDN8P56748 225 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 PIGFQ07326 219 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 GNA13Q14344 377 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 GSG1Q2KHT4 349 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 GLIPR1L2Q4G1C9 344 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 HOMEZQ8IX15 550 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 CCDC36Q8IYA8 594 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 TUBGCP3Q96CW5 907 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 DPY30Q9C005 99 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF385DQ9H6B1 395 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 C7orf69Q9H7B7 122 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 B3GNT2Q9NY97 397 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-203ENST00000409225 OPN4Q9UHM6 478 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 ZDHHC2Q9UIJ5 367 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 MID2Q9UJV3 735 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 RCE1Q9Y256 329 aa14.26□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF99A8MXY4 864 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-203ENST00000409225 NPHS1O60500 1241 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 FSHBP01225 129 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 NUDT17P0C025 328 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 TFPTP0C1Z6 253 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 PNMTP11086 282 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 PRTN3P24158 256 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 RPS23P62266 143 aaKnown RBP14.25□□□□□ -0.13
CHMP3-203ENST00000409225 GALK2Q01415 458 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 WBP2NLQ6ICG8 309 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF771Q7L3S4 317 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-203ENST00000409225 CNPY4Q8N129 248 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 C4orf33Q8N1A6 199 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 DVL3Q92997 716 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-203ENST00000409225 NEURL3Q96EH8 262 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 TRNT1Q96Q11 434 aaKnown RBP14.25□□□□□ -0.13
CHMP3-203ENST00000409225 RLIMQ9NVW2 624 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 SEC14L4Q9UDX3 406 aa14.25□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF346Q9UL40 294 aaKnown RBP14.25□□□□□ -0.13
CHMP3-203ENST00000409225 DNAJC9-AS1A6NH13 148 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 M0R3G1 203 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 IGHV2-5P01817 119 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF14P17017 642 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-203ENST00000409225 RPS4Y1P22090 263 aaKnown RBP14.24□□□□□ -0.13
CHMP3-203ENST00000409225 COPZ1P61923 177 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 CCL8P80075 99 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 C1DQ13901 141 aaKnown RBP14.24□□□□□ -0.13
CHMP3-203ENST00000409225 FXNQ16595 210 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 NKPD1Q17RQ9 610 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 PHYHD1Q5SRE7 291 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 ATG16L1Q676U5 607 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 RNF130Q86XS8 419 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF440Q8IYI8 595 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 MGARPQ8TDB4 240 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 LRRC58Q96CX6 371 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 SLC35A5Q9BS91 424 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 GRPEL1Q9HAV7 217 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 TAAR3PQ9P1P4 343 aa14.24□□□□□ -0.13
CHMP3-203ENST00000409225 PRSS51A0A1B0GVH4 220 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 SMIM23A6NLE4 172 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 NPIPB7O75200 414 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 AHSA1O95433 338 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 DBIP07108 87 aaKnown RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 KRT4P19013 534 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 GTF2E2P29084 291 aaKnown RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 ALDH3A1P30838 453 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 ACAA2P42765 397 aaKnown RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 PTDSS1P48651 473 aaKnown RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 IL13RA1P78552 427 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 MAD2L1Q13257 205 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 CHI3L2Q15782 390 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 CARD17Q5XLA6 110 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 LRRC74BQ6ZQY2 392 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 PIK3C3Q8NEB9 887 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 OR8J2Q8NGG1 315 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 MFSD8Q8NHS3 518 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 TAF15Q92804 592 aaKnown RBP eCLIP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 ZNF75AQ96N20 296 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 OXGR1Q96P68 337 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 OR2M2Q96R28 347 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 MECRQ9BV79 373 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 MTHFD2LQ9H903 347 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 MED29Q9NX70 200 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 NOP53Q9NZM5 478 aaKnown RBP14.23□□□□□ -0.13
CHMP3-203ENST00000409225 B3GAT1Q9P2W7 334 aa14.23□□□□□ -0.13
CHMP3-203ENST00000409225 FTCDNL1E5RQL4 147 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 NR2F1P10589 423 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 NCF2P19878 526 aaPredicted RBP14.22□□□□□ -0.13
CHMP3-203ENST00000409225 GATA3P23771 443 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 RAD52P43351 418 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 RPS5P46782 204 aaKnown RBP14.22□□□□□ -0.13
CHMP3-203ENST00000409225 GIPRP48546 466 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 LCN2P80188 198 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 EMX2Q04743 252 aa14.22□□□□□ -0.13
CHMP3-203ENST00000409225 BAMBIQ13145 260 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms