RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CD247P20963 164 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 HTR2AP28223 471 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 APOBEC3AP31941 199 aaPredicted RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 IFNA8P32881 189 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 NTF4P34130 210 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ARFIP2P53365 341 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 MTPNP58546 118 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 SNRPD2P62316 118 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ROR2Q01974 943 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 DMTNQ08495 405 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 PUDPQ08623 228 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 PMS2P3Q13401 168 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 RAB35Q15286 201 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ADRM1Q16186 407 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 HDDC2Q7Z4H3 204 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 IL17RDQ8NFM7 739 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 OR4F15Q8NGB8 312 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 OR8J3Q8NGG0 315 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 PROX1Q92786 737 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 TAAR8Q969N4 342 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 THOC1Q96FV9 657 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC41A3Q96GZ6 507 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC38A2Q96QD8 506 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 MCHR1Q99705 422 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ARHGDIGQ99819 225 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ECSITQ9BQ95 431 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 RHNO1Q9BSD3 238 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 CACNG6Q9BXT2 260 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 POLR2J2Q9GZM3 115 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 POLR2J3Q9H1A7 115 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 IKZF5Q9H5V7 419 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 KAT8Q9H7Z6 458 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 GID8Q9NWU2 228 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 MRPL39Q9NYK5 338 aaKnown RBP7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 USP22Q9UPT9 525 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 AP3M1Q9Y2T2 418 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 PRR14LQ5THK1 2151 aa7.95□□□□□ -1.14
SNORD88A-201ENST00000408314 ZFHX3Q15911 3703 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 IGKV1D-42A0A075B6H8 117 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 TRAPPC13A5PLN9 417 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF726A6NNF4 738 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 E7EQL1 145 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 MRASO14807 208 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 TPST1O60507 370 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF432O94892 652 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 IGHV4-39P01824 125 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC25A16P16260 332 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 HOXB4P17483 251 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 LSP1P33241 339 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 ARR3P36575 388 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 CDH12P55289 794 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 FOXG1P55316 489 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 POU3F1Q03052 451 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 TNK1Q13470 666 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 VMACQ2NL98 169 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 HIKESHIQ53FT3 197 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 TTC33Q6PID6 262 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 ARPINQ7Z6K5 226 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 PXKQ7Z7A4 578 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 RETREG3Q86VR2 466 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 PTOV1Q86YD1 416 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 SMYD1Q8NB12 490 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 OR6N1Q8NGY5 312 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 OR5J2Q8NH18 312 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 BCL2L2Q92843 193 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 LRR1Q96L50 414 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 C1QTNF6Q9BXI9 259 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 REG4Q9BYZ8 158 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 DENND2DQ9H6A0 471 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 MYOZ1Q9NP98 299 aaPredicted RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 STX18Q9P2W9 335 aaKnown RBP7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 SPEF1Q9Y4P9 236 aa7.94□□□□□ -1.14
SNORD88A-201ENST00000408314 TLN2Q9Y4G6 2542 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 HTR3EA5X5Y0 456 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CPSF4LA6NMK7 179 aaKnown RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF99A8MXY4 864 aaPredicted RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ATP6V1G2-DDX39BF2Z307 99 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 M0QX08 132 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 M0R3H8 397 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 NDUFAB1O14561 156 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 TRAF3IP2O43734 574 aaPredicted RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 TLX2O43763 284 aaPredicted RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 SSX4O60224 188 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 UPK3AO75631 287 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CD8AP01732 235 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 BGLAPP02818 100 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 HIST1H2ABP04908 130 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 NR2C1P13056 603 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 AHCYP23526 432 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ACVR1BP36896 505 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC25A3Q00325 362 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 SPOCK1Q08629 439 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 NPTX1Q15818 432 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CEACAM16Q2WEN9 425 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 GLIPR1L2Q4G1C9 344 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ENTPD8Q5MY95 495 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 C11orf71Q6IPW1 123 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CCDC80Q76M96 950 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 HIST3H2AQ7L7L0 130 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 DPPA2Q7Z7J5 298 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms