RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 HSD11B2P80365 405 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ZNF117Q03924 483 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 FAPQ12884 760 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 MAB21L1Q13394 359 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 KCTD20Q7Z5Y7 419 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ZFAND1Q8TCF1 268 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ADAMTS14Q8WXS8 1223 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ADAD1Q96M93 576 aaKnown RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 TSPAN32Q96QS1 320 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 KLHDC3Q9BQ90 382 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 NUDT9Q9BW91 350 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ADAM19Q9H013 955 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 SLC25A18Q9H1K4 315 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 PCED1AQ9H1Q7 454 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 UCKL1Q9NWZ5 548 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 PCDHGA9Q9Y5G4 932 aaKnown RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 TMEM72A0PK05 275 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ZFPL1O95159 310 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 DHFRP00374 187 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 HIST1H2ABP04908 130 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 OR8G3PP0DMU2 310 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 SMAD4Q13485 552 aaKnown RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 MESTQ5EB52 335 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 BCL2L15Q5TBC7 163 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 ESPNLQ6ZVH7 1005 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 HIST3H2AQ7L7L0 130 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 TDHQ8IZJ6 230 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 SDR16C5Q8N3Y7 309 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 OR2T4Q8NH00 348 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 LILRB4Q8NHJ6 448 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 HSD17B8Q92506 261 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 RGP1Q92546 391 aaPredicted RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 HIST1H2ACQ93077 130 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 RNF166Q96A37 237 aaPredicted RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 DERL3Q96Q80 235 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 TRAF4Q9BUZ4 470 aaPredicted RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 PHF7Q9BWX1 381 aaPredicted RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 FKRPQ9H9S5 495 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 SRA1Q9HD15 236 aaKnown RBP15.31■□□□□ 0.04
NUP50-203ENST00000407019 KLHDC2Q9Y2U9 406 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 NUBP2Q9Y5Y2 271 aa15.31■□□□□ 0.04
NUP50-203ENST00000407019 A6NL46 340 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 CTDSPLO15194 276 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 HCRTR2O43614 444 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 GSTZ1O43708 216 aaPredicted RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 ITGA10O75578 1167 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 RENP00797 406 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 FBLP22087 321 aaKnown RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 OR1D5P58170 312 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 RPL6Q02878 288 aaKnown RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 EBPQ15125 230 aaKnown RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 HLA-DQA1Q5Y7H0 255 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 CDC20BQ86Y33 519 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 SIAH3Q8IW03 269 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 TIGD4Q8IY51 512 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 TAAR8Q969N4 342 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 ORAI1Q96D31 301 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 GFI1Q99684 422 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 RTN4RQ9BZR6 473 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 NRSN2Q9GZP1 204 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 NUDT15Q9NV35 164 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 RABL2AQ9UBK7 228 aaPredicted RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 MRM2Q9UI43 246 aaKnown RBP15.3■□□□□ 0.04
NUP50-203ENST00000407019 RABL2BQ9UNT1 228 aa15.3■□□□□ 0.04
NUP50-203ENST00000407019 TRAV6A0A075B6T7 132 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 A0A0A6YYJ9 748 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 TCRBV16S1A1N1A0A5B0 115 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 IFITM5A6NNB3 132 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 H7C1C5 153 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 AIPO00170 330 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 GMFGO60234 142 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 RPP14O95059 124 aaKnown RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 EVI2BP34910 448 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 LCN6P62502 163 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 ZP2Q05996 745 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 Q5BKY6 102 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 HES5Q5TA89 166 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 PRAMEF17Q5VTA0 474 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 GPR139Q6DWJ6 353 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 C9orf40Q8IXQ3 194 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 CARFQ8N187 725 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 C7orf57Q8NEG2 295 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 OR1L3Q8NH93 324 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 C7orf50Q9BRJ6 194 aaKnown RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 KNL1Q8NG31 2342 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 IGHV1OR21-1A0A087WYE8 117 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 CDC14CA4D256 554 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 DCTN6O00399 190 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 SCO2O43819 266 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 TMEM127O75204 238 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 UPK3AO75631 287 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 TCRBP04435 133 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 CXCR1P25024 350 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 ITPKBP27987 946 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 NR0B1P51843 470 aaKnown RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 TNK1Q13470 666 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 ALKBH1Q13686 389 aaKnown RBP15.29■□□□□ 0.04
NUP50-203ENST00000407019 UBXN2BQ14CS0 331 aa15.29■□□□□ 0.04
NUP50-203ENST00000407019 SNAP47Q5SQN1 464 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms