RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 OR9A2Q8NGT5 310 aa12.73□□□□□ -0.37
RUNX3-203ENST00000399916 UBE2E3Q969T4 207 aa12.73□□□□□ -0.37
RUNX3-203ENST00000399916 COA4Q9NYJ1 87 aa12.73□□□□□ -0.37
RUNX3-203ENST00000399916 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
RUNX3-203ENST00000399916 TIMM8BQ9Y5J9 83 aaPredicted RBP12.73□□□□□ -0.37
RUNX3-203ENST00000399916 KPTNQ9Y664 436 aa12.73□□□□□ -0.37
RUNX3-203ENST00000399916 OR6C76A6NM76 312 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 PRKRAO75569 313 aaKnown RBP12.72□□□□□ -0.37
RUNX3-203ENST00000399916 F10P00742 488 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 GAMTQ14353 236 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 GRHL2Q6ISB3 625 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 LINC00471Q8N535 108 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 OR56A3Q8NH54 315 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 DNAJB11Q9UBS4 358 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 TMEM129A0AVI4 362 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 CDHR4A6H8M9 788 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 K7ERQ8 282 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 CLN5O75503 358 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 CLDN11O75508 207 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 CSF1P09603 554 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 GAAP10253 952 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 DRD2P14416 443 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 RBMXP38159 391 aaKnown RBP12.72□□□□□ -0.37
RUNX3-203ENST00000399916 ARHGAP11BQ3KRB8 267 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 GGNBP1Q5YKI7 109 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
RUNX3-203ENST00000399916 TMEM99Q8N816 258 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 HAS2Q92819 552 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 AVPR2P30518 371 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 EPHB3P54753 998 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 ACTBP60709 375 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 ACTG1P63261 375 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 ZNF239Q16600 458 aaKnown RBP12.72□□□□□ -0.37
RUNX3-203ENST00000399916 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
RUNX3-203ENST00000399916 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 TPRA1Q86W33 373 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 ZNF559Q9BR84 538 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 ARHGAP9Q9BRR9 750 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 CCDC86Q9H6F5 360 aaKnown RBP12.72□□□□□ -0.37
RUNX3-203ENST00000399916 DUSP22Q9NRW4 184 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 PISDQ9UG56 409 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 FBXL4Q9UKA2 621 aa12.72□□□□□ -0.37
RUNX3-203ENST00000399916 C17orf113A0A1B0GUU1 675 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 GAPDHSO14556 408 aaPredicted RBP12.71□□□□□ -0.37
RUNX3-203ENST00000399916 PPP1R3DO95685 299 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 UQCRC2P22695 453 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 CDK2P24941 298 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 SNRPNP63162 240 aaKnown RBP12.71□□□□□ -0.37
RUNX3-203ENST00000399916 RASGEF1BQ0VAM2 473 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 OR5I1Q13606 314 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 ETV3LQ6ZN32 361 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 OR51D1Q8NGF3 324 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 OR6N2Q8NGY6 317 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 RSC1A1Q92681 617 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 OPN3Q9H1Y3 402 aaPredicted RBP12.71□□□□□ -0.37
RUNX3-203ENST00000399916 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 ZNF780BQ9Y6R6 833 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 PIKFYVEQ9Y2I7 2098 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 TRIP12Q14669 1992 aaPredicted RBP12.71□□□□□ -0.37
RUNX3-203ENST00000399916 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 ANTXRLA6NF34 631 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 DVL2O14641 736 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 GJB5O95377 273 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 DHPSP49366 369 aaPredicted RBP12.71□□□□□ -0.37
RUNX3-203ENST00000399916 MLF1P58340 268 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 Q5PR19 223 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 MITD1Q8WV92 249 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 SMARCD2Q92925 531 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 SAGE1Q9NXZ1 904 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 TREM2Q9NZC2 230 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 SLC2A1P11166 492 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 HOXD9P28356 352 aaPredicted RBP12.71□□□□□ -0.37
RUNX3-203ENST00000399916 MPPED2Q15777 294 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 AWAT1Q58HT5 328 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 LRIF1Q5T3J3 769 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 SDR9C7Q8NEX9 313 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 SLC38A5Q8WUX1 472 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 HHIPQ96QV1 700 aa12.71□□□□□ -0.37
RUNX3-203ENST00000399916 LRP3O75074 770 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 OR2F2O95006 317 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 GP1BAP07359 652 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 TACSTD2P09758 323 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 ATF1P18846 271 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 RAB5AP20339 215 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.38
RUNX3-203ENST00000399916 KHKP50053 298 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 OR2F1Q13607 317 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 LRFN5Q96NI6 719 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 PATZ1Q9HBE1 687 aaKnown RBP12.71□□□□□ -0.38
RUNX3-203ENST00000399916 DMRT1Q9Y5R6 373 aa12.71□□□□□ -0.38
RUNX3-203ENST00000399916 A8MXK9 166 aa12.7□□□□□ -0.38
RUNX3-203ENST00000399916 GABARAPH6UMI1 98 aa12.7□□□□□ -0.38
RUNX3-203ENST00000399916 SCN2BO60939 215 aa12.7□□□□□ -0.38
RUNX3-203ENST00000399916 CD3DP04234 171 aa12.7□□□□□ -0.38
RUNX3-203ENST00000399916 PET100P0DJ07 73 aa12.7□□□□□ -0.38
RUNX3-203ENST00000399916 ITGB7P26010 798 aa12.7□□□□□ -0.38
RUNX3-203ENST00000399916 XCR1P46094 333 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms