RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FKBP7Q9Y680 259 aa16.08■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MEIOCA2RUB1 952 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SOX1O00570 391 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 XKRYO14609 159 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SELENOFO60613 162 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DXOO77932 396 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TPPPO94811 219 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 HEXBP07686 556 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 HLA-DMAP28067 261 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DDOSTP39656 456 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RPS11P62280 158 aaKnown RBP eCLIP16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DCDP81605 110 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 HSD17B12Q53GQ0 312 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PRAMEF17Q5VTA0 474 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RPTNQ6XPR3 784 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 WDR5BQ86VZ2 330 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TIGD4Q8IY51 512 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PRR22Q8IZ63 422 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR51L1Q8NGJ5 315 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SAP25Q8TEE9 199 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RYDENQ9NUL5 291 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TAS2R10Q9NYW0 307 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EML5Q05BV3 1969 aa16.08■□□□□ 0.16
HLA-DQB1-204ENST00000399084 A0A0C4DFX4 3053 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TMED7-TICAM2A0A0A6YYA0 188 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 B4DXG7 233 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 LYRM1O43325 122 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NUDT14O95848 222 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 IGHMP01871 453 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RAF1P04049 648 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EPXP11678 715 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EFNA3P52797 238 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PMS2CLQ68D20 193 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ANKRD37Q7Z713 158 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CDC20BQ86Y33 519 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SAMD12Q8N8I0 201 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NFAM1Q8NET5 270 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ASB17Q8WXJ9 295 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ADAMTS14Q8WXS8 1223 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ADAD1Q96M93 576 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NEDD4LQ96PU5 975 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 WDR76Q9H967 626 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 INIPQ9NRY2 104 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SLC22A11Q9NSA0 550 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CTSFQ9UBX1 484 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SPATA2Q9UM82 520 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 COPS3Q9UNS2 423 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TMED7Q9Y3B3 224 aa16.07■□□□□ 0.16
HLA-DQB1-204ENST00000399084 A0A1W2PRG6 482 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 C19orf67A6NJJ6 358 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 VSTM2BA6NLU5 285 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ITGA10O75578 1167 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DCNP07585 359 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 MSX1P28360 303 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DHPSP49366 369 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 HCCSP53701 268 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CD300CQ08708 224 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 P2RY14Q15391 338 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF574Q6ZN55 896 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR6F1Q8NGZ6 308 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TRMT10AQ8TBZ6 339 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TSPAN32Q96QS1 320 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NRSN2Q9GZP1 204 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SLC26A1Q9H2B4 701 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SACM1LQ9NTJ5 587 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TAS2R5Q9NYW4 299 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF221Q9UK13 617 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PILRBQ9UKJ0 227 aa16.06■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FAM240BA0A1B0GVZ2 78 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ANKUB1A6NFN9 424 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NPIPB13A6NJU9 1138 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 IDSB3KWA1 339 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NPIPB4C9JG80 1138 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SSX4O60224 188 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PRKNO60260 465 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SUSD5O60279 629 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FZD7O75084 574 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ALOX12BO75342 701 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 UBL3O95164 117 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 AHSA1O95433 338 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PRKCAP17252 672 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SRMP19623 302 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 APOBEC1P41238 236 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SCAND1P57086 179 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RPL27P61353 136 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 MESTQ5EB52 335 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 C1orf140Q5VVS0 124 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 BICRALQ6AI39 1079 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FDX2Q6P4F2 183 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SPATC1Q76KD6 591 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ADGRG3Q86Y34 549 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF248Q8NDW4 579 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 C15orf40Q8WUR7 153 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNRF4Q8WWF5 429 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RFT1Q96AA3 541 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RTN4RQ9BZR6 473 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SLITRK2Q9H156 845 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TXNIPQ9H3M7 391 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ACOXLQ9NUZ1 547 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms