RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SLC14A1Q13336 389 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF684Q5T5D7 378 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 ZNF529Q6P280 563 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 B3GNT8Q7Z7M8 397 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 RAB27BO00194 218 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 DHRS4L1P0CG22 281 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 B3GLCTQ6Y288 498 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 Q6ZPB1 254 aaPredicted RBP13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 ESPNLQ6ZVH7 1005 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 WFDC8Q8IUA0 241 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 GOT1L1Q8NHS2 421 aaPredicted RBP13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 ELMOD3Q96FG2 381 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC41A2Q96JW4 573 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 SORCS2Q96PQ0 1159 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 PFDN5Q99471 154 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 CMSS1Q9BQ75 279 aaKnown RBP13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC19A3Q9BZV2 496 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC23A2Q9UGH3 650 aa13.17□□□□□ -0.3
PCDHA11-201ENST00000398640 TRBV4-1A0A0J9YWV2 114 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 KLK10O43240 276 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 GRPP07492 148 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 TSFMP43897 325 aaKnown RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 CXADRP78310 365 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 GK2Q14410 553 aaPredicted RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 OR2B2Q9GZK3 357 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 WWTR1Q9GZV5 400 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 MKRN2OSH3BPM6 223 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 ABHD16AO95870 558 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 B3GALT4O96024 378 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 BIDP55957 195 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 MTCP1P56278 107 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 SSX2Q16385 188 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 CGB2Q6NT52 195 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 KATNB1Q9BVA0 655 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 LUZP4Q9P127 313 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 HCRTR1O43613 425 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 OR8G3PP0DMU2 310 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 AVPR2P30518 371 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 VEGFCP49767 419 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 LTBQ06643 244 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 RAB40BQ12829 278 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 HEPHL1Q6MZM0 1159 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 GDPD1Q8N9F7 314 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 OR4N2Q8NGD1 307 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 RNF128Q8TEB7 428 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 TAAR9Q96RI9 348 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 BCL7BQ9BQE9 202 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 HRASLSQ9HDD0 168 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 TBC1D29Q9UFV1 150 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 H3BMQ9 156 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 PKLRP30613 574 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 CLDN6P56747 220 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 CCL7P80098 99 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC6A19Q695T7 634 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 LCORQ96JN0 433 aaPredicted RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 METTL9Q9H1A3 318 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 A0A1W2PPV4 95 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 OPRL1P41146 370 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 CYCSP99999 105 aaKnown RBP13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC9A3R2Q15599 337 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 TCTN1Q2MV58 587 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 TMEM71Q6P5X7 295 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 OR14K1Q8NGZ2 314 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
PCDHA11-201ENST00000398640 hCG_1809904A0A1W2PP81 198 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 A0A1W2PPE2 198 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 A0A1W2PR64 198 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 A0A1W2PRV1 198 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 DNAJB6O75190 326 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 MT-CO3P00414 261 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 AADACL3Q5VUY0 350 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 TBPL2Q6SJ96 375 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC46A3Q7Z3Q1 461 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 PATE1Q8WXA2 126 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 ZFP57Q9NU63 452 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 SDHAF2Q9NX18 166 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 ATAD5Q96QE3 1844 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 ARAFP10398 606 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 BEX5Q5H9J7 111 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 VRK3Q8IV63 474 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 LINC00346Q8IVM7 164 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 C8orf44Q96CB5 159 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 CNTNAP3BQ96NU0 1288 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 GFOD1Q9NXC2 390 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 MRPS14O60783 128 aaKnown RBP13.15□□□□□ -0.3
PCDHA11-201ENST00000398640 SLC1A3P43003 542 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms