RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 CFAP73A6NFT4 308 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 AGAP5A6NIR3 686 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 TMEM233B4DJY2 109 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 G3V4G9 280 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 PPIHO43447 177 aaKnown RBP8.05□□□□□ -1.12
NEDD9-203ENST00000397378 FRS3O43559 492 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 PLPP2O43688 288 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 RP2O75695 350 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 CHRNGP07510 517 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 UQCRBP14927 111 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 CXCR1P25024 350 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 CALRP27797 417 aaKnown RBP8.05□□□□□ -1.12
NEDD9-203ENST00000397378 GLRXP35754 106 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 CLDN8P56748 225 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 ARF1P84077 181 aaKnown RBP8.05□□□□□ -1.12
NEDD9-203ENST00000397378 EPS8Q12929 822 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 PCLAFQ15004 111 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 GPAT3Q53EU6 434 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 PRAMEF8Q5VWM4 474 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 PRAMEF7Q5VXH5 474 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 SAXO2Q658L1 398 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 TNFAIP8L2Q6P589 184 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-203ENST00000397378 MDP1Q86V88 176 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 LSRQ86X29 649 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF440Q8IYI8 595 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 FNDC5Q8NAU1 212 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 OR8J2Q8NGG1 315 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 FAM110DQ8TAY7 271 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-203ENST00000397378 C3orf30Q96M34 536 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 GPA33Q99795 319 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 TAPBPLQ9BX59 468 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 SLC38A1Q9H2H9 487 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF385DQ9H6B1 395 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 MMP24Q9Y5R2 645 aa8.05□□□□□ -1.12
NEDD9-203ENST00000397378 DOCK11Q5JSL3 2073 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 A0A1B0GUS0 222 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 SLC22A31A6NKX4 558 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 A8MVM7 634 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 NPHS1O60500 1241 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 SCN2BO60939 215 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 NPIPB7O75200 414 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 DEAF1O75398 565 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 NCR1O76036 304 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 FSHBP01225 129 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 CHRM4P08173 479 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 G6PDP11413 515 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF35P13682 527 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 TCN1P20061 433 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 RPS4Y1P22090 263 aaKnown RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 UQCRC2P22695 453 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 GATA3P23771 443 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 ALDH3B1P43353 468 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 SEC24CP53992 1094 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 RPS23P62266 143 aaKnown RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 HPCAP84074 193 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 GNA13Q14344 377 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 PGS1Q32NB8 556 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 MMEL1Q495T6 779 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 MRPL2Q5T653 305 aaKnown RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 ASPHD2Q6ICH7 369 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 OR4F3Q6IEY1 312 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 HMGN2P46Q86SG4 172 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 EGFL6Q8IUX8 553 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 NOA1Q8NC60 698 aaKnown RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 OR4A15Q8NGL6 344 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 RAB39BQ96DA2 213 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 NEURL3Q96EH8 262 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF75AQ96N20 296 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 TRNT1Q96Q11 434 aaKnown RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF665Q9H7R5 613 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 BEX1Q9HBH7 125 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 GPR35Q9HC97 309 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 B3GNT2Q9NY97 397 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 TESQ9UGI8 421 aaKnown RBP8.04□□□□□ -1.12
NEDD9-203ENST00000397378 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
NEDD9-203ENST00000397378 A0A096LPI6 279 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 PRSS51A0A1B0GVH4 220 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF99A8MXY4 864 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 HMGN4O00479 90 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 COPEO14579 308 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 SHOX2O60902 331 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 FZD7O75084 574 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 SLC43A1O75387 559 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 TFPTP0C1Z6 253 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 IL7RP16871 459 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF14P17017 642 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF43P17038 809 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 CLDN17P56750 224 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 LOXL3P58215 753 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 TXNL4AP83876 142 aaKnown RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 BNIP2Q12982 314 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 MAD2L1Q13257 205 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-203ENST00000397378 SLC9A3R2Q15599 337 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 TAF9Q16594 264 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 FXNQ16595 210 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 GSG1Q2KHT4 349 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 CEACAM16Q2WEN9 425 aa8.03□□□□□ -1.12
NEDD9-203ENST00000397378 TRMT5Q32P41 509 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms