RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 A0A1W2PRG6 482 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ZNF354AO60765 605 aaPredicted RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 SC5DO75845 299 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 TMED10P49755 219 aaKnown RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 C17orf67Q0P5P2 114 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 C1QL3Q5VWW1 255 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 HBMQ6B0K9 141 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 MRPL14Q6P1L8 145 aaKnown RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 RPL22L1Q6P5R6 122 aaKnown RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 LYPD4Q6UWN0 246 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 PAMR1Q6UXH9 720 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 PXKQ7Z7A4 578 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 TPRA1Q86W33 373 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ADGRG3Q86Y34 549 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 GDPD1Q8N9F7 314 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 AGBL5Q8NDL9 886 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ST8SIA1Q92185 356 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 GHSRQ92847 366 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 SLC25A36Q96CQ1 311 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 WDR54Q9H977 334 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 MARCH7Q9H992 704 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 INIPQ9NRY2 104 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ACOXLQ9NUZ1 547 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 GPN3Q9UHW5 284 aaPredicted RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 TMEM200CA6NKL6 621 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 FAM171A2A8MVW0 826 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 BOLA2-SMG1P6H3BVE0 249 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 H7C1C5 153 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 MAGEB4O15481 346 aaPredicted RBP13.54□□□□□ -0.24
CBX3-202ENST00000396386 HPGDSO60760 199 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 TMCC2O75069 709 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 ZFAND5O76080 213 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 WISP1O95388 367 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 CD1AP06126 327 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 IL7P13232 177 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 EDNRAP25101 427 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 SHC1P29353 583 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 LCN6P62502 163 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 SIRPAP78324 504 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 CCDC58Q4VC31 144 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 SLC22A8Q8TCC7 542 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 TTC9Q92623 222 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 C8orf44Q96CB5 159 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 TSSK2Q96PF2 358 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 NEURL2Q9BR09 285 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 TAS2R5Q9NYW4 299 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 FBXO4Q9UKT5 387 aa13.54□□□□□ -0.24
CBX3-202ENST00000396386 ASCC3Q8N3C0 2202 aaKnown RBP13.53□□□□□ -0.24
CBX3-202ENST00000396386 C11orf98E9PRG8 122 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 XKRYO14609 159 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 SLC19A2O60779 497 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 SPNP16150 400 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 GRPRP30550 384 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 ACSM3Q53FZ2 586 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 CNIH2Q6PI25 160 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 METAP1DQ6UB28 335 aaPredicted RBP13.53□□□□□ -0.24
CBX3-202ENST00000396386 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 CADM3Q8N126 398 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 TEX19Q8NA77 164 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 RNF138Q8WVD3 245 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
CBX3-202ENST00000396386 DNAJA3Q96EY1 480 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 TIGARQ9NQ88 270 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 ZNF346Q9UL40 294 aaKnown RBP13.53□□□□□ -0.24
CBX3-202ENST00000396386 TBC1D24Q9ULP9 559 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 PCNX3Q9H6A9 2034 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 TRBV2A0A0J9YWF9 115 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 GPRIN2O60269 458 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 TRIM3O75382 744 aaPredicted RBP13.53□□□□□ -0.24
CBX3-202ENST00000396386 PRKCAP17252 672 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 BAK1Q16611 211 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 PYDC2Q56P42 97 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 IDNKQ5T6J7 187 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 TIGD4Q8IY51 512 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 OR13C5Q8NGS8 318 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 SNX18Q96RF0 628 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 MNTQ99583 582 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 OR11A1Q9GZK7 315 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 PPIL3Q9H2H8 161 aaKnown RBP13.53□□□□□ -0.24
CBX3-202ENST00000396386 GALNT9Q9HCQ5 603 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 KLRF1Q9NZS2 232 aa13.53□□□□□ -0.24
CBX3-202ENST00000396386 USP34Q70CQ2 3546 aa13.52□□□□□ -0.24
CBX3-202ENST00000396386 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 A0A1W2PQ09 198 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 OR2T1O43869 369 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 OR6A2O95222 327 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 IGHMP01871 453 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 PTBP1P26599 531 aaKnown RBP eCLIP13.52□□□□□ -0.25
CBX3-202ENST00000396386 CCKBRP32239 447 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 ZFP36L1Q07352 338 aaKnown RBP13.52□□□□□ -0.25
CBX3-202ENST00000396386 SCN1BQ07699 218 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 EEF1A1P5Q5VTE0 462 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 SLC6A19Q695T7 634 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 OR5M10Q6IEU7 315 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms