RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CTU2Q2VPK5 515 aaKnown RBP13.83□□□□□ -0.2
VAMP1-202ENST00000396308 SLC35F1Q5T1Q4 408 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 CXXC5Q7LFL8 322 aaKnown RBP13.83□□□□□ -0.2
VAMP1-202ENST00000396308 PXKQ7Z7A4 578 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 ADCK1Q86TW2 530 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 CCDC71Q8IV32 467 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-202ENST00000396308 FAM26EQ8N5C1 309 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 BPIFB6Q8NFQ5 453 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 FBLIM1Q8WUP2 373 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 LRR1Q96L50 414 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 CCNB1IP1Q9NPC3 277 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 ZNF226Q9NYT6 803 aa13.83□□□□□ -0.2
VAMP1-202ENST00000396308 FRYQ5TBA9 3013 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 A0A0J9YW62 118 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 TEX13CA0A0J9YWL9 993 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 IRGMA1A4Y4 181 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 NPIPB13A6NJU9 1138 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 NPIPB4C9JG80 1138 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 NPIPA2E9PIF3 369 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 NPIPA3F8WFD2 350 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 PRKYO43930 277 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 IGHMP01871 453 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 LYNP07948 512 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 FMO3P31513 532 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 GABARAPL2P60520 117 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 RPL27P61353 136 aaKnown RBP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 HSF1Q00613 529 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 POU3F1Q03052 451 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 LGALS3BPQ08380 585 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 OCLNQ16625 522 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 TMEM201Q5SNT2 666 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 GPAT4Q86UL3 456 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 GGNQ86UU5 652 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 RBMXL3Q8N7X1 1067 aaKnown RBP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 LRRC75AQ8NAA5 344 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 OR52E2Q8NGJ4 325 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 OR10D3Q8NH80 312 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 ZNF566Q969W8 418 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 PNPLA2Q96AD5 504 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 OXGR1Q96P68 337 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 TXNIPQ9H3M7 391 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 TAS2R5Q9NYW4 299 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 DNAJC27Q9NZQ0 273 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 SCOCQ9UIL1 159 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 MCTS1Q9ULC4 181 aaKnown RBP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 ADAM18Q9Y3Q7 739 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 RPL36Q9Y3U8 105 aaKnown RBP13.82□□□□□ -0.2
VAMP1-202ENST00000396308 CNTRLQ7Z7A1 2325 aa13.82□□□□□ -0.2
VAMP1-202ENST00000396308 TAF4O00268 1085 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 CXCL13O43927 109 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SMNDC1O75940 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
VAMP1-202ENST00000396308 TXNDC12O95881 172 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 BCL10O95999 233 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 PLGP00747 810 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-202ENST00000396308 IGHG3P01860 377 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 PDGFAP04085 211 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 FAM87AP0C7U9 286 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SFTPCP11686 197 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 NR2C1P13056 603 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 ZNF708P17019 499 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 ZNF43P17038 809 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 STARP49675 285 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 LHX2P50458 406 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 CLDN20P56880 219 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SRYQ05066 204 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 ZNF239Q16600 458 aaKnown RBP13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SLC25A30Q5SVS4 291 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 LCN1P1Q5VSP4 162 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 NXNL2Q5VZ03 156 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 TRILQ7L0X0 811 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-202ENST00000396308 PM20D2Q8IYS1 436 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 TMEM99Q8N816 258 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 KDF1Q8NAX2 398 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SDR9C7Q8NEX9 313 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 IPCEF1Q8WWN9 437 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-202ENST00000396308 MYDGFQ969H8 173 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SARAFQ96BY9 339 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 TSPAN32Q96QS1 320 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 PRRG4Q9BZD6 226 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 ENKD1Q9H0I2 346 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 ZNF696Q9H7X3 374 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 VCX3AQ9NNX9 186 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 FANCFQ9NPI8 374 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SEC14L4Q9UDX3 406 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 GPR52Q9Y2T5 361 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 SNX5Q9Y5X3 404 aa13.81□□□□□ -0.2
VAMP1-202ENST00000396308 EFCAB10A6NFE3 127 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 AQP7O14520 342 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 PRODHO43272 600 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
VAMP1-202ENST00000396308 HIST1H1CP16403 213 aaKnown RBP13.8□□□□□ -0.2
VAMP1-202ENST00000396308 GABRB1P18505 474 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 ACVR1BP36896 505 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 CDH11P55287 796 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 CLDN15P56746 228 aa13.8□□□□□ -0.2
VAMP1-202ENST00000396308 CLDN18P56856 261 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms