RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RHOXF1Q8NHV9 184 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 TVP23CQ96ET8 276 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 OR52A1Q9UKL2 312 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 UBIAD1Q9Y5Z9 338 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 B4GALT5O43286 388 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 SPINT2O43291 252 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 DHPSP49366 369 aaPredicted RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 AGTR2P50052 363 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 MTCP1P56278 107 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ZNF626Q68DY1 528 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 NRARPQ7Z6K4 114 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ZNF321PQ8N8H1 164 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ATP13A2Q9NQ11 1180 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 OR6C76A6NM76 312 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ALX3O95076 343 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 SELPP16109 830 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 OR13F1Q8NGS4 319 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 UBALD1Q8TB05 177 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 THAP3Q8WTV1 239 aaPredicted RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 P2RX7Q99572 595 aaKnown RBP12.53□□□□□ -0.4
USP49-203ENST00000394253 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 BLACEA4D250 179 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 TGFB1I1O43294 461 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 CLDN22Q8N7P3 220 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 BRI3BPQ8WY22 251 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 GPR20Q99678 358 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 VRTNQ9H8Y1 702 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ERVFC1-1P60608 527 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 SLC14A2Q15849 920 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 ZDHHC24Q6UX98 284 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 CYB5D2Q8WUJ1 264 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
USP49-203ENST00000394253 TYRP1P17643 537 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 TMEM115Q12893 351 aaPredicted RBP12.52□□□□□ -0.4
USP49-203ENST00000394253 GPM6BQ13491 265 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 DEFB134Q4QY38 66 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 RAB7BQ96AH8 199 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 S1PR3Q99500 378 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 NOCTQ9UK39 431 aaKnown RBP12.52□□□□□ -0.4
USP49-203ENST00000394253 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 OR7C1O76099 320 aaPredicted RBP12.52□□□□□ -0.4
USP49-203ENST00000394253 GCGP01275 180 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 TNFSF8P32971 234 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 SOX18P35713 384 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 HBA1P69905 142 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 INCA1Q0VD86 236 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 TP53I3Q53FA7 332 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 RPUSD3Q6P087 351 aaKnown RBP12.52□□□□□ -0.4
USP49-203ENST00000394253 FCRLAQ7L513 359 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 IL22RA1Q8N6P7 574 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 CREB3L4Q8TEY5 395 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.4
USP49-203ENST00000394253 STACQ99469 402 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 OR2J1Q9GZK6 312 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 SHARPINQ9H0F6 387 aa12.52□□□□□ -0.4
USP49-203ENST00000394253 NAT1P18440 290 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 DIO3P55073 304 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 GPR18Q14330 331 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 BOCQ9BWV1 1114 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 GALNT9Q9HCQ5 603 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 NRIP3Q9NQ35 241 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.41
USP49-203ENST00000394253 IKZF1Q13422 519 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 ACOT7LQ6ZUV0 252 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 PLXDC1Q8IUK5 500 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 ADGRG7Q96K78 797 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 C8AP07357 584 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 TTC32Q5I0X7 151 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 OR1J2Q8NGS2 313 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 SLC35B2Q8TB61 432 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 NRP1O14786 923 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.41
USP49-203ENST00000394253 ETFDHQ16134 617 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 UNC50Q53HI1 259 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 DPH2Q9BQC3 489 aaPredicted RBP12.52□□□□□ -0.41
USP49-203ENST00000394253 MED13LQ71F56 2210 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 YJEFN3A6XGL0 299 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 SULT2B1O00204 365 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 PPOXP50336 477 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 GATMP50440 423 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
USP49-203ENST00000394253 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 SLC5A8Q8N695 610 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 C1orf127Q8N9H9 656 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 TFAP2CQ92754 450 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 TTYH3Q9C0H2 523 aa12.52□□□□□ -0.41
USP49-203ENST00000394253 A6NCN8 305 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms