RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ABCE1P61221 599 aaKnown RBP13.22□□□□□ -0.29
CHMP3-202ENST00000393773 UFM1P61960 85 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 CHI3L2Q15782 390 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 RPS26P11Q5JNZ5 115 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-202ENST00000393773 PHYHD1Q5SRE7 291 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 NUDCD3Q8IVD9 361 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-202ENST00000393773 OR2M2Q96R28 347 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 NARFLQ9H6Q4 476 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 MEAF6Q9HAF1 191 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 AIG1Q9NVV5 245 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 B3GNT2Q9NY97 397 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 USP22Q9UPT9 525 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 CMAHPQ9Y471 501 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 CMYA5Q8N3K9 4069 aa13.22□□□□□ -0.29
CHMP3-202ENST00000393773 TANC2Q9HCD6 1990 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 TMEM89A2RUT3 159 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 VSTM5A8MXK1 200 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF99A8MXY4 864 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 KCNAB3O43448 404 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 RGS9O75916 674 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 NCR1O76036 304 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 TFP02787 698 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF14P17017 642 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 NCF2P19878 526 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 GPR6P46095 362 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 RPL14P50914 215 aaKnown RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 CRISP3P54108 245 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 HILS1P60008 231 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 SLC9B1Q4ZJI4 515 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 ATG16L1Q676U5 607 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 C6orf89Q6UWU4 347 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF621Q6ZSS3 439 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 GPR137CQ8N3F9 429 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 IL17RDQ8NFM7 739 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 YIPF5Q969M3 257 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 SLC25A36Q96CQ1 311 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 OXGR1Q96P68 337 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 LPAR2Q9HBW0 351 aa13.21□□□□□ -0.29
CHMP3-202ENST00000393773 MYEF2Q9P2K5 600 aaKnown RBP13.21□□□□□ -0.29
CHMP3-202ENST00000393773 M0R082 166 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 HLA-HP01893 362 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 GAAP10253 952 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF35P13682 527 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ETFAP13804 333 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ACHEP22303 614 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 GTF2E2P29084 291 aaKnown RBP13.2□□□□□ -0.3
CHMP3-202ENST00000393773 CAPZA2P47755 286 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ARFIP2P53365 341 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 FXNQ16595 210 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 C1orf229Q6ZS94 237 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-202ENST00000393773 CCDC36Q8IYA8 594 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 PIK3C3Q8NEB9 887 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF417Q8TAU3 575 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF418Q8TF45 676 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-202ENST00000393773 FAM216AQ8WUB2 273 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 SLC38A5Q8WUX1 472 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 TMEM19Q96HH6 336 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 OR52E6Q96RD3 313 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF587Q96SQ5 575 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-202ENST00000393773 SYT3Q9BQG1 590 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 SPATA9Q9BWV2 254 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF275Q9NSD4 429 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF224Q9NZL3 707 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 CALML5Q9NZT1 146 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-202ENST00000393773 GRIP1Q9Y3R0 1128 aa13.2□□□□□ -0.3
CHMP3-202ENST00000393773 IGKV1D-42A0A075B6H8 117 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 WDR91A4D1P6 747 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 SDHDO14521 159 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 AIM2O14862 343 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 RP2O75695 350 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 KRT75O95678 551 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 COL8A2P25067 703 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 ALDH3B1P43353 468 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 LMO4P61968 165 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 HOXC5Q00444 222 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 MAD2L1BPQ15013 274 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-202ENST00000393773 LARS2Q15031 903 aaKnown RBP13.19□□□□□ -0.3
CHMP3-202ENST00000393773 GSG1Q2KHT4 349 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 SHQ1Q6PI26 577 aaKnown RBP13.19□□□□□ -0.3
CHMP3-202ENST00000393773 THSD4Q6ZMP0 1018 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 USP43Q70EL4 1123 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 ZNF627Q7L945 461 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 WDFY1Q8IWB7 410 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 OR51F2Q8NH61 342 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 SGMS2Q8NHU3 365 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 GPR45Q9Y5Y3 372 aa13.19□□□□□ -0.3
CHMP3-202ENST00000393773 M0R3G1 203 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 RFXANKO14593 260 aa13.18□□□□□ -0.3
CHMP3-202ENST00000393773 BIRC5O15392 142 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms