RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 PIK3C3Q8NEB9 887 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 SNX33Q8WV41 574 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 RAB1CQ92928 201 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 POP5Q969H6 163 aaKnown RBP6.76□□□□□ -1.33
CASP4-201ENST00000393150 PPCDCQ96CD2 204 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 AURKBQ96GD4 344 aaPredicted RBP6.76□□□□□ -1.33
CASP4-201ENST00000393150 APIPQ96GX9 242 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 THUMPD3Q9BV44 507 aaKnown RBP6.76□□□□□ -1.33
CASP4-201ENST00000393150 ACPTQ9BZG2 426 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 MS4A7Q9GZW8 240 aaPredicted RBP6.76□□□□□ -1.33
CASP4-201ENST00000393150 LAT2Q9GZY6 243 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 PIGUQ9H490 435 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 SERHL2Q9H4I8 314 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 ESM1Q9NQ30 184 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 DECR2Q9NUI1 292 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 ACER3Q9NUN7 267 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 KLHL21Q9UJP4 597 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 MID2Q9UJV3 735 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 NUP50Q9UKX7 468 aa6.76□□□□□ -1.33
CASP4-201ENST00000393150 ARPC4-TTLL3A0A0A6YYG9 625 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 A0A1W2PPW3 197 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 DUXAA6NLW8 204 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 CLDN34H7C241 214 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 PDLIM1O00151 329 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 ATP8B1O43520 1251 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 PLPP2O43688 288 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 CSTAP01040 98 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 CTAGE8P0CG41 777 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 UQCRBP14927 111 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 TCP1P17987 556 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 PHBP35232 272 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 HSD17B3P37058 310 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 MAP2K6P52564 334 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 RAE1P78406 368 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 SLC3A1Q07837 685 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 NPRL3Q12980 569 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 SNTB2Q13425 540 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 LASP1Q14847 261 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 TOMM34Q15785 309 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 PCGF3Q3KNV8 242 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 TECRLQ5HYJ1 363 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 FAM71E1Q6IPT2 247 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 C16orf87Q6PH81 154 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 ZNF771Q7L3S4 317 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 DOK3Q7L591 496 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 GRINAQ7Z429 371 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 R3HCC1LQ7Z5L2 792 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 GPAT4Q86UL3 456 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 CTAGE4Q8IX94 777 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 GLB1L3Q8NCI6 653 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 CPEB3Q8NE35 698 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 MAGEE2Q8TD90 523 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 ZNF483Q8TF39 744 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 TMIGD2Q96BF3 282 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 METTL2AQ96IZ6 378 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 DUX5Q96PT3 197 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 ZNF382Q96SR6 550 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 MRI1Q9BV20 369 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 SF3B5Q9BWJ5 86 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 ACTRT3Q9BYD9 372 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 MRPL46Q9H2W6 279 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 ZNF385DQ9H6B1 395 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 CRLF2Q9HC73 371 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 G6PC2Q9NQR9 355 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 ZNF275Q9NSD4 429 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 ACSS1Q9NUB1 689 aaPredicted RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 ZCCHC3Q9NUD5 404 aaKnown RBP6.75□□□□□ -1.33
CASP4-201ENST00000393150 PCDHGB4Q9UN71 923 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 SNX24Q9Y343 169 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 FLVCR1Q9Y5Y0 555 aa6.75□□□□□ -1.33
CASP4-201ENST00000393150 SLC22A23A1A5C7 686 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 AGAP5A6NIR3 686 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 ZNF716A6NP11 495 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 CLDN25C9JDP6 229 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 H3BQF6 201 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 CCDC188H7C350 402 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 SEC22BO75396 215 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 FOXH1O75593 365 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 VAMP5O95183 116 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 H6PDO95479 791 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 LGI1O95970 557 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 AK1P00568 194 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 INHBAP08476 426 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 RPS17P08708 135 aaKnown RBP6.74□□□□□ -1.33
CASP4-201ENST00000393150 UBTFL6P0CB48 400 aaPredicted RBP6.74□□□□□ -1.33
CASP4-201ENST00000393150 ACP2P11117 423 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 CBR1P16152 277 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 TCN1P20061 433 aaPredicted RBP6.74□□□□□ -1.33
CASP4-201ENST00000393150 COL8A2P25067 703 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 RPL3P39023 403 aaKnown RBP6.74□□□□□ -1.33
CASP4-201ENST00000393150 PKNOX1P55347 436 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 SLC25A3Q00325 362 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 CAV1Q03135 178 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 MALLQ13021 153 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 HFEQ30201 348 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 LSM12Q3MHD2 195 aaKnown RBP6.74□□□□□ -1.33
CASP4-201ENST00000393150 DCST2Q5T1A1 773 aa6.74□□□□□ -1.33
CASP4-201ENST00000393150 KRT80Q6KB66 452 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms