RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FAM173BQ6P4H8 233 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 KDM7AQ6ZMT4 941 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TMEM26Q6ZUK4 368 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TPRA1Q86W33 373 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 BATF2Q8N1L9 274 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CSGALNACT2Q8N6G5 542 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 DNAAF3Q8N9W5 541 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TRPV1Q8NER1 839 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 OR8J1Q8NGP2 316 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 OR2L8Q8NGY9 312 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 OR2T3Q8NH03 318 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CDC26Q8NHZ8 85 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CNIH3Q8TBE1 160 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 RAB3IL1Q8TBN0 382 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 MAIP1Q8WWC4 291 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 ISG20Q96AZ6 181 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 RASD2Q96D21 266 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF641Q96N77 438 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TSNARE1Q96NA8 513 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 RPRD1AQ96P16 312 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CCT7Q99832 543 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF670Q9BS34 389 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF2Q9BSG1 426 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TRIM62Q9BVG3 475 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 SPZ1Q9BXG8 430 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 FRMD8P1Q9BZ68 369 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 RHBGQ9H310 441 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 AZI2Q9H6S1 392 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 LRRC19Q9H756 370 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TDRD3Q9H7E2 651 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 EMC3Q9P0I2 261 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 HMGXB4Q9UGU5 601 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 NUFIP1Q9UHK0 495 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 ATPIF1Q9UII2 106 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 KIAA1257Q9ULG3 409 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CBY1Q9Y3M2 126 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 COL5A1P20908 1838 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CARMIL1Q5VZK9 1371 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CCDC7Q96M83 1385 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ARHGAP42A6NI28 874 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 LRRIQ3A6PVS8 624 aaPredicted RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SPECC1L-ADORA2AF8WAN1 911 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SULT2B1O00204 365 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 WRBO00258 174 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PRRG1O14668 218 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 XPO1O14980 1071 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CHADO15335 359 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 TBX19O60806 448 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 B4GALT2O60909 372 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SCGB2A1O75556 95 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 OR5F1O95221 314 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 LGI1O95970 557 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SERPINA3P01011 423 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 IL1BP01584 269 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 MRPL3P09001 348 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CHTF8P0CG12 524 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CLUP10909 449 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 POU2F1P14859 743 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 DRD5P21918 477 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ANXA13P27216 316 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 MAGEA1P43355 309 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 GTF2A1P52655 376 aaPredicted RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CRYBB1P53674 252 aaPredicted RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ATP5IP56385 69 aaPredicted RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 RWDD2BP57060 319 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ARPC4P59998 168 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 TPM4P67936 248 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ASPHQ12797 758 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SPP2Q13103 211 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PPIL2Q13356 520 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 MAB21L1Q13394 359 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ATXN7L3Q14CW9 347 aaPredicted RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SF3A2Q15428 464 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 MAPRE2Q15555 327 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 NDUFA9Q16795 377 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF829Q3KNS6 432 aaPredicted RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ABCA11PQ4W5N1 156 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 C5orf47Q569G3 176 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 HSP90AA4PQ58FG1 418 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PIGGQ5H8A4 983 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PIP5KL1Q5T9C9 394 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 OR6B2Q6IFH4 312 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 WDR88Q6ZMY6 472 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 EFL1Q7Z2Z2 1120 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 VPS36Q86VN1 386 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 FAM228AQ86W67 206 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 OFCC1Q8IZS5 231 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SYCE1Q8N0S2 351 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CYB561D1Q8N8Q1 229 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 CCNYQ8ND76 341 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 SPATA4Q8NEY3 305 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 OR6X1Q8NH79 312 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF461Q8TAF7 563 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 DQX1Q8TE96 717 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PDCD6IPQ8WUM4 868 aaKnown RBP1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PGLYRP4Q96LB8 373 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 NSMCE2Q96MF7 247 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 OR5B2Q96R09 309 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 PANX2Q96RD6 677 aa1.59□□□□□ -2.15
TRAV40-201ENST00000390467 TSG101Q99816 390 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms