RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 RAD1O60671 282 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 ABLIM3O94929 683 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 CSF1P09603 554 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 C6P13671 934 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 CD34P28906 385 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 PRRT3Q5FWE3 981 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 STAC2Q6ZMT1 411 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 KCTD9Q7L273 389 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 LRRTM1Q86UE6 522 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 C15orf40Q8WUR7 153 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 MIB2Q96AX9 1013 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 LMF1Q96S06 567 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 VN1R3Q9BXE9 311 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 KCNK15Q9H427 330 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 ADAM29Q9UKF5 820 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 CASP8AP2Q9UKL3 1982 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 TMEM82A0PJX8 343 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 GXYLT2A0PJZ3 443 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 EEF1E1-BLOC1S5C9J1V9 151 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 IMPA2O14732 288 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 CLEC3AO75596 197 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 CSF2RBP32927 897 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 RFC3P40938 356 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 BCL6P41182 706 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 RBM39Q14498 530 aaKnown RBP11.16□□□□□ -0.62
HERC6-203ENST00000380265 NKPD1Q17RQ9 610 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 SLC48A1Q6P1K1 146 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 TCEAL3Q969E4 200 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 GFI1Q99684 422 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 OR52A5Q9H2C5 316 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 ZMAT3Q9HA38 289 aaKnown RBP11.16□□□□□ -0.62
HERC6-203ENST00000380265 PRSS16Q9NQE7 514 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 UPB1Q9UBR1 384 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 SSX5O60225 188 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 ZNF254O75437 659 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 RD3LP0DJH9 198 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 PRSS3P35030 304 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 SKP1P63208 163 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 PRAMEF8Q5VWM4 474 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 PRAMEF7Q5VXH5 474 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 MFSD12Q6NUT3 480 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 SLC46A2Q9BY10 475 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 ATG5Q9H1Y0 275 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 FBXO34Q9NWN3 711 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 SPHK1Q9NYA1 384 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 TAS2R8Q9NYW2 309 aa11.16□□□□□ -0.62
HERC6-203ENST00000380265 A0A1B0GTH9 108 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 LRRC72A6NJI9 287 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 SULT1C2O00338 296 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 GPRIN2O60269 458 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 EIF3GO75821 320 aaKnown RBP eCLIP11.15□□□□□ -0.62
HERC6-203ENST00000380265 RAB3DO95716 219 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 VAMP1P23763 118 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 PRKXP51817 358 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 ZNF136P52737 540 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 PPIAP62937 165 aaKnown RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 TRA2BP62995 288 aaKnown RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 STEAP1BQ6NZ63 245 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 SLC36A1Q7Z2H8 476 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 ADAD1Q96M93 576 aaKnown RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 ULBP3Q9BZM4 244 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 C2orf42Q9NWW7 574 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 ZNF337Q9Y3M9 751 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 KLF2Q9Y5W3 355 aaPredicted RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 RP1L1Q8IWN7 2480 aaPredicted RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 KIAA1671Q9BY89 1806 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 TXNL1O43396 289 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 GLSO94925 669 aaPredicted RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 OR4E1P0C645 316 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 SELPP16109 830 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 NFYBP25208 207 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 RAB5BP61020 215 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 TMEM215Q68D42 235 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 DND1Q8IYX4 353 aaKnown RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 CAMKVQ8NCB2 501 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 OR5AK2Q8NH90 309 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 CNTNAP3BQ96NU0 1288 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 ZNF346Q9UL40 294 aaKnown RBP11.15□□□□□ -0.62
HERC6-203ENST00000380265 MKL2Q9ULH7 1088 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
HERC6-203ENST00000380265 C5orf51A6NDU8 294 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 ZNF860A6NHJ4 632 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 ELOA3DA6NLF2 546 aaPredicted RBP11.15□□□□□ -0.63
HERC6-203ENST00000380265 C4orf51C9J302 202 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 H7C417 338 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 AGPAT2O15120 278 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 LILRB5O75023 590 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 SNAPINO95295 136 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 CENPAP49450 140 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 TEAD2Q15562 447 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 ELOA3BQ3SY89 546 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 ABHD17CQ6PCB6 329 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 FAM122BQ7Z309 247 aa11.15□□□□□ -0.63
HERC6-203ENST00000380265 ADIPOR2Q86V24 386 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms