RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 RNASE6Q93091 150 aaKnown RBP10.58□□□□□ -0.71
PCNA-201ENST00000379143 UTP4Q969X6 686 aaKnown RBP10.58□□□□□ -0.71
PCNA-201ENST00000379143 TMEM45BQ96B21 275 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 ALPK1Q96QP1 1244 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 FUZQ9BT04 418 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 C12orf49Q9H741 205 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 REEP1Q9H902 201 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 CCM2LQ9NUG4 571 aaPredicted RBP10.58□□□□□ -0.71
PCNA-201ENST00000379143 ELOVL5Q9NYP7 299 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 SEC14L4Q9UDX3 406 aa10.58□□□□□ -0.71
PCNA-201ENST00000379143 TRBV4-1A0A0J9YWV2 114 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 OR6C65A6NJZ3 312 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 EFCAB9A8MZ26 197 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 PRSS44E7EML9 344 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 GNGT2O14610 69 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 PIP5K1CO60331 668 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 FKBP6O75344 327 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 TSPAN19P0C672 248 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 FUT4P22083 530 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 AHCYP23526 432 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 OR3A2P47893 321 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 LIMS1P48059 325 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 TFF3Q07654 80 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 TBPL2Q6SJ96 375 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 NUFIP2Q7Z417 695 aaKnown RBP10.58□□□□□ -0.72
PCNA-201ENST00000379143 OAFQ86UD1 273 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 LSRQ86X29 649 aaPredicted RBP10.58□□□□□ -0.72
PCNA-201ENST00000379143 KIF18BQ86Y91 864 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 UEVLDQ8IX04 471 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 LRRC17Q8N6Y2 441 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 ZNF610Q8N9Z0 462 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 ANKK1Q8NFD2 765 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 APH1AQ96BI3 265 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 ZNF775Q96BV0 537 aaPredicted RBP10.58□□□□□ -0.72
PCNA-201ENST00000379143 DUS3LQ96G46 650 aaKnown RBP10.58□□□□□ -0.72
PCNA-201ENST00000379143 RBM24Q9BX46 236 aaKnown RBP10.58□□□□□ -0.72
PCNA-201ENST00000379143 NDEL1Q9GZM8 345 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 OPN3Q9H1Y3 402 aaPredicted RBP10.58□□□□□ -0.72
PCNA-201ENST00000379143 SLC24A3Q9HC58 644 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 B3GAT1Q9P2W7 334 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 RCE1Q9Y256 329 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 HIF3AQ9Y2N7 669 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 LYVE1Q9Y5Y7 322 aa10.58□□□□□ -0.72
PCNA-201ENST00000379143 DOPEY1Q5JWR5 2465 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 BLOC1S5-TXNDC5H3BN57 136 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 HNRNPRO43390 633 aaKnown RBP10.57□□□□□ -0.72
PCNA-201ENST00000379143 RNF13O43567 381 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 OR10H3O60404 316 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 CLDN1O95832 211 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 MAKP20794 623 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 OMPP47874 163 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 PRPS1P60891 318 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 ACTR3P61158 418 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCNA-201ENST00000379143 POU3F1Q03052 451 aaPredicted RBP10.57□□□□□ -0.72
PCNA-201ENST00000379143 CCNIQ14094 377 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 EXOC3L2Q2M3D2 409 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 CASP12Q6UXS9 341 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 TFAP2EQ6VUC0 442 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 AAED1Q7RTV5 226 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 KDM8Q8N371 416 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 ZIC4Q8N9L1 334 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 ARMC1Q9NVT9 282 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 TAS2R5Q9NYW4 299 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 PLEKHB1Q9UF11 243 aaPredicted RBP10.57□□□□□ -0.72
PCNA-201ENST00000379143 SAMHD1Q9Y3Z3 626 aaKnown RBP10.57□□□□□ -0.72
PCNA-201ENST00000379143 AP4S1Q9Y587 144 aa10.57□□□□□ -0.72
PCNA-201ENST00000379143 INTS1Q8N201 2190 aaKnown RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 CSMD1Q96PZ7 3565 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 A1L4Q6 167 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 NPIPB13A6NJU9 1138 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 NPIPB4C9JG80 1138 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 C11orf98E9PRG8 122 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 TRAF3IP2O43734 574 aaPredicted RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 DEAF1O75398 565 aaPredicted RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 CCNB2O95067 398 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 FCGR1AP12314 374 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 POU2F1P14859 743 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 UQCRC1P31930 480 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 CD79BP40259 229 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 GPR4P46093 362 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 ERFP50548 548 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 ARHGDIAP52565 204 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 CLDN17P56750 224 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 RPS4XP62701 263 aaKnown RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 SORDQ00796 357 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 RPL18Q07020 188 aaKnown RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 P2RY6Q15077 328 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 SEC23BQ15437 767 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 FBXW9Q5XUX1 488 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 C1orf94Q6P1W5 598 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 ZNF474Q6S9Z5 364 aaPredicted RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 Q6ZT83 130 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 HDDC2Q7Z4H3 204 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 ABHD12BQ7Z5M8 362 aaPredicted RBP10.56□□□□□ -0.72
PCNA-201ENST00000379143 EPHX4Q8IUS5 362 aa10.56□□□□□ -0.72
PCNA-201ENST00000379143 UBE2J2Q8N2K1 259 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms