RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 GABREP78334 506 aa13.08□□□□□ -0.32
TRIM13-202ENST00000378182 CYCSP99999 105 aaKnown RBP13.08□□□□□ -0.32
TRIM13-202ENST00000378182 ACOT11Q8WXI4 607 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-202ENST00000378182 ZBTB8AQ96BR9 441 aa13.08□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-202ENST00000378182 FAM173AQ9BQD7 235 aa13.08□□□□□ -0.32
TRIM13-202ENST00000378182 FAM26DQ5JW98 314 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 PGAP1Q75T13 922 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 PPA2Q9H2U2 334 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 HPRP00739 348 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 HLA-AP01891 365 aaKnown RBP13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CDK1P06493 297 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 UBE2NLQ5JXB2 153 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 BARX1Q9HBU1 254 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-202ENST00000378182 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 PRAMEF25A6NGN4 478 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CPT2P23786 658 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 RPL35P42766 123 aaKnown RBP13.07□□□□□ -0.32
TRIM13-202ENST00000378182 RAC1P63000 192 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 C6orf106Q9H6K1 298 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-202ENST00000378182 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 FBXO7Q9Y3I1 522 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 LINC01553A4QN01 128 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 MED6O75586 246 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 BLVRBP30043 206 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-202ENST00000378182 SOX18P35713 384 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 LDLRAD1Q5T700 205 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 OR8G2PQ6IF36 304 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 LYPD8Q6UX82 237 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 OR7G2Q8NG99 324 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 C11orf40Q8WZ69 217 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 FZR1Q9UM11 496 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 PROCRQ9UNN8 238 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CLDN12P56749 244 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 EXT1Q16394 746 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 ATF6BQ99941 703 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CSF1P09603 554 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 RACK1P63244 317 aaKnown RBP13.07□□□□□ -0.32
TRIM13-202ENST00000378182 SLC7A9P82251 487 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
TRIM13-202ENST00000378182 TMEM72A0PK05 275 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 SDC1P18827 310 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 EXD3Q8N9H8 876 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 OR10AD1Q8NGE0 317 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ARL11Q969Q4 196 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF587Q96SQ5 575 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 LHPPQ9H008 270 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 NPFFR2Q9Y5X5 522 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 OLFM2O95897 454 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 SNRNP70P08621 437 aaKnown RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 GPR176Q14439 515 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF169Q14929 603 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 PM20D2Q8IYS1 436 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 LCORQ96JN0 433 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 FUNDC2Q9BWH2 189 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 VRTNQ9H8Y1 702 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 KCNJ16Q9NPI9 418 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 C5orf49A4QMS7 147 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 PHF1O43189 567 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 BCL6P41182 706 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 DCAF7P61962 342 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 C14orf28Q4W4Y0 310 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 TMEM207Q6UWW9 146 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 BTLAQ7Z6A9 289 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 TCTEX1D2Q8WW35 142 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ZFP57Q9NU63 452 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 BTNL2Q9UIR0 455 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 OSGIN2Q9Y236 505 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 MYOM1P52179 1685 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 A0A1W2PS29 197 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 SLC5A10A0PJK1 596 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 SCGB1D1O95968 90 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 IRS1P35568 1242 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 OPCMLQ14982 345 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 FOXRED1Q96CU9 486 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 RBM14Q96PK6 669 aaKnown RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ZIC5Q96T25 663 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ANKRD61A6NGH8 418 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 KCNK2O95069 426 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 APOA2P02652 100 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 MFAP5Q13361 173 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 VASH2Q86V25 355 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 CPXM2Q8N436 756 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 MINDY1Q8N5J2 469 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 PRELID3BQ9Y3B1 194 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 METTL15A6NJ78 407 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 PIAS2O75928 621 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 NSA2O95478 260 aaKnown RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 GALEQ14376 348 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 APOOLQ6UXV4 268 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 CPEB2Q7Z5Q1 589 aaKnown RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 FGGYQ96C11 551 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms