RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 A0A0D9SG52 128 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 OR6C6A6NF89 314 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-201ENST00000378156 GAPDHSO14556 408 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-201ENST00000378156 UTS2O95399 124 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 GLULP15104 373 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 ZNF585AQ6P3V2 769 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 RFPL4BQ6ZWI9 263 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 GDF7Q7Z4P5 450 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 CLDN22Q8N7P3 220 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 CCL4L1Q8NHW4 92 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 ZNF566Q969W8 418 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 TMEFF2Q9UIK5 374 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-201ENST00000378156 PADI1Q9ULC6 663 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 A3GALT2U3KPV4 340 aa13.88□□□□□ -0.19
NPHP4-201ENST00000378156 YY2O15391 372 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 P2RX6O15547 441 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 ZNF749O43361 778 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 CHATP28329 748 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 CD1CP29017 333 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 SHC1P29353 583 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 TRHRP34981 398 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-201ENST00000378156 C17orf67Q0P5P2 114 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 BTN1A1Q13410 526 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 SYT14P1Q58G82 188 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 TMEM201Q5SNT2 666 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 VASNQ6EMK4 673 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 CALHM3Q86XJ0 350 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 CSNK2A3Q8NEV1 391 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 NPRL2Q8WTW4 380 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 RBM38Q9H0Z9 239 aaKnown RBP13.87□□□□□ -0.19
NPHP4-201ENST00000378156 SLC6A20Q9NP91 592 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 BOKQ9UMX3 212 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-201ENST00000378156 KIF13BQ9NQT8 1826 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 FER1L6Q2WGJ9 1857 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 PLRG1O43660 514 aaKnown RBP13.87□□□□□ -0.19
NPHP4-201ENST00000378156 MPIG6BO95866 241 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 RAB40ALP0C0E4 278 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 GAAP10253 952 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 CD79AP11912 226 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 SQSTM1Q13501 440 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 PRAMEF20Q5VT98 475 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 RAB40AQ8WXH6 277 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 MED30Q96HR3 178 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 PLCXD1Q9NUJ7 323 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 RBFOX1Q9NWB1 397 aaKnown RBP13.87□□□□□ -0.19
NPHP4-201ENST00000378156 ASCC3Q8N3C0 2202 aaKnown RBP13.87□□□□□ -0.19
NPHP4-201ENST00000378156 A0A1B0GX78 115 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 FOXN4Q96NZ1 517 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 DUSP22Q9NRW4 184 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 TMPRSS11EQ9UL52 423 aa13.87□□□□□ -0.19
NPHP4-201ENST00000378156 ZNF705FA8MVS1 300 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 SUSD5O60279 629 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 MT-ND4P03905 459 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 TP53P04637 393 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 ZNF705DP0CH99 300 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 ZNF705BP0CI00 300 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 POLR2HP52434 150 aaKnown RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 CRMP1Q14194 572 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 KIAA0040Q15053 153 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 HYAL4Q2M3T9 481 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 TRMT12Q53H54 448 aaKnown RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 ESCO2Q56NI9 601 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 AGBL4Q5VU57 503 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 ACSM5Q6NUN0 579 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 TCTN3Q6NUS6 607 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 C5orf46Q6UWT4 87 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 NKAIN4Q8IVV8 208 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 LINC00615Q96LM1 132 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 BOLA1Q9Y3E2 137 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 OR51B4Q9Y5P0 310 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 SBF2Q86WG5 1849 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 TMEM269A0A1B0GVZ9 245 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 RAB19A4D1S5 217 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 GMDSO60547 372 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 GPX5O75715 221 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 OLFM2O95897 454 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 IGHEP01854 428 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 CEACAM5P06731 702 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 TGFBR3Q03167 851 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 NXNL2Q5VZ03 156 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 OR7E24Q6IFN5 339 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 OR6V1Q8N148 313 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 FOXQ1Q9C009 403 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 C11orf54Q9H0W9 315 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 SPNS1Q9H2V7 528 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 SEMA4GQ9NTN9 838 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 SLC6A14Q9UN76 642 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 POLHQ9Y253 713 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 LY75O60449 1722 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 A0A087WUU8 490 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 HTR3BO95264 441 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 AKR1C2P52895 323 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 TIAL1Q01085 375 aaKnown RBP eCLIP13.86□□□□□ -0.19
NPHP4-201ENST00000378156 ECH1Q13011 328 aa13.86□□□□□ -0.19
NPHP4-201ENST00000378156 SF3B4Q15427 424 aaKnown RBP eCLIP13.86□□□□□ -0.195e-8■■■■□ 21.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms