RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ATG2AQ2TAZ0 1938 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 GABARAPH6UMI1 98 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 SDC3O75056 442 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 THBS1P07996 1170 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 HTR2CP28335 458 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 VEGFCP49767 419 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 HTRA4P83105 476 aaPredicted RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 SPOCK1Q08629 439 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 CTF1Q16619 201 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 CCSMST1Q4G0I0 132 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 C14orf28Q4W4Y0 310 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 GPR157Q5UAW9 335 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 STEAP1BQ6NZ63 245 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 LPCAT3Q6P1A2 487 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 FAM111BQ6SJ93 734 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 B3GLCTQ6Y288 498 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 ABHD12BQ7Z5M8 362 aaPredicted RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 ACBD4Q8NC06 268 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 RBPMSQ93062 196 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 TEAD3Q99594 435 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 MICU1Q9BPX6 476 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 RBM24Q9BX46 236 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 RBM38Q9H0Z9 239 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 CHST8Q9H2A9 424 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 CHRDQ9H2X0 955 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 NKX2-4Q9H2Z4 354 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 MYEF2Q9P2K5 600 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 RHBDD3Q9Y3P4 386 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 PMS2P2O95744 297 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 TSPAN12O95859 305 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 LCATP04180 440 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 P04436 131 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 IFNA4P05014 189 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 SLC35E2P0CK97 266 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 SLC19A1P41440 591 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 CX3CR1P49238 355 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 EVX1P49640 407 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 GZMKP49863 264 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 LUMP51884 338 aaPredicted RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 TAGLNQ01995 201 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 ALKBH1Q13686 389 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 GPR176Q14439 515 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 C18orf63Q68DL7 685 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 BCDIN3DQ7Z5W3 292 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 PTOV1Q86YD1 416 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 IL17RCQ8NAC3 791 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 OR56B1Q8NGI3 324 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 OR10K1Q8NGX5 313 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 PAQR8Q8TEZ7 354 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 FGF13Q92913 245 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 FYTTD1Q96QD9 318 aaKnown RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 CCNL2Q96S94 520 aaPredicted RBP7.76□□□□□ -1.17
VPS36-201ENST00000378060 MED18Q9BUE0 208 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 OR10A5Q9H207 317 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 OR10A2Q9H208 303 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 SLC38A1Q9H2H9 487 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 KIF25Q9UIL4 384 aa7.76□□□□□ -1.17
VPS36-201ENST00000378060 A0A1W2PS29 197 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ICMTO60725 284 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 IRS1P35568 1242 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ETV5P41161 510 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ETV1P50549 477 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 MRPL58Q14197 206 aaKnown RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 FGL2Q14314 439 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LTB4RQ15722 352 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LCN10Q6JVE6 187 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ZNF852Q6ZMS4 543 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TECPR1Q7Z6L1 1165 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 CALHM3Q86XJ0 350 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ZNF761Q86XN6 746 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 DEFB119Q8N690 84 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 FRMD1Q8N878 549 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LMNTD1Q8N9Z9 388 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SLC16A11Q8NCK7 471 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 GLYATL2Q8WU03 294 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TMEM255BQ8WV15 326 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 NUDT8Q8WV74 236 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 OR14A2Q96R54 314 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 STACQ99469 402 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 DOK1Q99704 481 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SLC25A19Q9HC21 320 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 WASH6PQ9NQA3 447 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 RP1L1Q8IWN7 2480 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 B4DXG7 233 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 H3BML4 177 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SULT2B1O00204 365 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TMEM127O75204 238 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 IFNA10P01566 189 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 RAF1P04049 648 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 F13BP05160 661 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SERPINE2P07093 398 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 NID1P14543 1247 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SRMP19623 302 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 CLDN2P57739 230 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ERVFC1P60507 584 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 OR7A5Q15622 319 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 HMGN3Q15651 99 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SLC22A6Q4U2R8 563 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms