RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GANABQ14697 944 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TMIGD2Q96BF3 282 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SLC25A37Q9NYZ2 338 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LCATP04180 440 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR8U9P0C7N5 309 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 MPV17LQ2QL34 196 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 C1orf189Q5VU69 101 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CHST4Q8NCG5 386 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PLSCR2Q9NRY7 297 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 AKAP12Q02952 1782 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FABP7O15540 132 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LIPAP38571 399 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PREPP48147 710 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ARF3P61204 181 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ARF1P84077 181 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF471Q9BX82 626 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LMAN2Q12907 356 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 DTX3Q8N9I9 347 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 NPDC1Q9NQX5 325 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 MGAT4CQ9UBM8 478 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 A0A087WUU8 490 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 HOXD4P09016 255 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 DUSP1P28562 367 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 THEM6Q8WUY1 208 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 RBCK1Q9BYM8 510 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SRRQ9GZT4 340 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 F5H423 210 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LRIT3Q3SXY7 679 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PTOV1Q86YD1 416 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SLC35A4Q96G79 324 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 NMES1Q9C002 83 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 RLIMQ9NVW2 624 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ADRB1P08588 477 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PAX6P26367 422 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 AVPI1Q5T686 147 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SIGIRRQ6IA17 410 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SOSTQ9BQB4 213 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CHMP1AQ9HD42 196 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TXNRD2Q9NNW7 524 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 BRINP1O60477 761 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PCSK6P29122 969 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 IMPA1P29218 277 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 LIMS1P48059 325 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CEBPEQ15744 281 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PCGF3Q3KNV8 242 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR8G5Q8NG78 346 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TSPAN10Q9H1Z9 355 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR9K2Q8NGE7 335 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FCF1Q9Y324 198 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PIRTP0C851 137 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ELAVL4P26378 380 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CPEB3Q8NE35 698 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 STXBP6Q8NFX7 210 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF668Q96K58 619 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ATG5Q9H1Y0 275 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TAC3Q9UHF0 121 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 A0A087WUJ7 227 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 RFPL4AA6NLU0 287 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 RFPL4AL1F8VTS6 287 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SEC11BP0C7V7 166 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 DTYMKP23919 212 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CTSL3PQ5NE16 218 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 DCST2Q5T1A1 773 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR6K6Q8NGW6 343 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 FAM3DQ96BQ1 224 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 GIFP27352 417 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ARFRP1Q13795 201 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM207Q6UWW9 146 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 NUFIP2Q7Z417 695 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 APIPQ96GX9 242 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ACTR10Q9NZ32 417 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 MPTX1A8MV57 137 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 TAPBPO15533 448 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ZP3P21754 424 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 ALKBH1Q13686 389 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CNN3Q15417 329 aaKnown RBP4.56□□□□□ -1.68
PCDH9-201ENST00000377861 DMRTA1Q5VZB9 504 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 C5orf34Q96MH7 638 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 SLC6A17Q9H1V8 727 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 CLEC4AQ9UMR7 237 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR1Q1Q15612 314 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 PXT1Q8NFP0 134 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 OR5J2Q8NH18 312 aa4.56□□□□□ -1.68
PCDH9-201ENST00000377861 A0A1W2PS29 197 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 HMGN4O00479 90 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ST8SIA5O15466 376 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 YIF1AO95070 293 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 COX5BP10606 129 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 IRF1P10914 325 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 PNLIPP16233 465 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 CD34P28906 385 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF419Q96HQ0 510 aaPredicted RBP4.55□□□□□ -1.68
PCDH9-201ENST00000377861 PLAC1Q9HBJ0 212 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM82A0PJX8 343 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 HPGDSO60760 199 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 DDAH2O95865 285 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 APOC3P02656 99 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 HEXAP06865 529 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 DLSTP36957 453 aa4.55□□□□□ -1.68
PCDH9-201ENST00000377861 SNTB1Q13884 538 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms