RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ACKR1Q16570 336 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 C22orf42Q6IC83 251 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 OPN5Q6U736 354 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 OR5J2Q8NH18 312 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 ST8SIA1Q92185 356 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 C1GALT1C1Q96EU7 318 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 GPX7Q96SL4 187 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-206ENST00000376496 KLHL21Q9UJP4 597 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 COPS3Q9UNS2 423 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 SLC6A5Q9Y345 797 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 CORINQ9Y5Q5 1042 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 SPTBN2O15020 2390 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 AKR7A3O95154 331 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 SDHAP31040 664 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 BMXP51813 675 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 LIMK1P53667 647 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 PON3Q15166 354 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 BTLAQ7Z6A9 289 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 THOC3Q96J01 351 aaKnown RBP11.36□□□□□ -0.59
CLCN6-206ENST00000376496 SMAD5Q99717 465 aaKnown RBP11.36□□□□□ -0.59
CLCN6-206ENST00000376496 ASPNQ9BXN1 380 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 SLIRPQ9GZT3 109 aaKnown RBP11.36□□□□□ -0.59
CLCN6-206ENST00000376496 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 ING1Q9UK53 422 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-206ENST00000376496 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 PCDHGA1Q9Y5H4 931 aa11.36□□□□□ -0.59
CLCN6-206ENST00000376496 GVINP1Q7Z2Y8 2422 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 CEP250Q9BV73 2442 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 FTCDNL1E5RQL4 147 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 CLEC2LP0C7M8 214 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 CPEP16870 476 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 SRSF6Q13247 344 aaKnown RBP11.35□□□□□ -0.59
CLCN6-206ENST00000376496 SNTA1Q13424 505 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 OR6V1Q8N148 313 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 SLC15A4Q8N697 577 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 C4orf36Q96KX1 117 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 HDHD5Q9BXW7 423 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 NMNAT2Q9BZQ4 307 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 PLPP3O14495 311 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 OR6A2O95222 327 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 RAB40ALP0C0E4 278 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 PSMA1P25786 263 aaKnown RBP11.35□□□□□ -0.59
CLCN6-206ENST00000376496 ACVR1BP36896 505 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 FABP5Q01469 135 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 CHAF1BQ13112 559 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 SGCBQ16585 318 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 BEST3Q8N1M1 668 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 SDHAF3Q9NRP4 125 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 INIPQ9NRY2 104 aa11.35□□□□□ -0.59
CLCN6-206ENST00000376496 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
CLCN6-206ENST00000376496 PRR32B1ATL7 298 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 IGF2P01344 180 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 IGHEP01854 428 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 APOBEC1P41238 236 aaKnown RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 CENPAP49450 140 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 DIO1P49895 249 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 GABREP78334 506 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 MYBPHQ13203 477 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 TOMM20Q15388 145 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 ETFDHQ16134 617 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 DGUOKQ16854 277 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 CRTC2Q53ET0 693 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 SLC22A10Q63ZE4 541 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 VASNQ6EMK4 673 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 SNX29P2Q8IUI4 249 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 PSMF1Q92530 271 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 UFD1Q92890 307 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 NUAK2Q9H093 628 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 TIMMDC1Q9NPL8 285 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 MED29Q9NX70 200 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 STUB1Q9UNE7 303 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 SF3B6Q9Y3B4 125 aaKnown RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 CD8B2A6NJW9 211 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 MS4A18H0YCH9 400 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 HPP00738 406 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 CD8BP10966 210 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 HTR3AP46098 478 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 SUMO3P55854 103 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 OC90Q02509 493 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 GALEQ14376 348 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 MS4A18Q3C1V0 323 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 ACER2Q5QJU3 275 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 USP43Q70EL4 1123 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 PLCZ1Q86YW0 608 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 MCFD2Q8NI22 146 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 C5orf34Q96MH7 638 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 CNN2Q99439 309 aaKnown RBP11.34□□□□□ -0.59
CLCN6-206ENST00000376496 KCNS3Q9BQ31 491 aa11.34□□□□□ -0.59
CLCN6-206ENST00000376496 BCL7BQ9BQE9 202 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms