RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ZNF544Q6NX49 715 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 C3orf33Q6P1S2 294 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 SSX8Q7RTT4 187 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 NET1Q7Z628 596 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 SERPINA11Q86U17 422 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 ADGRG3Q86Y34 549 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 NFKBIDQ8NI38 313 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 SLC25A43Q8WUT9 341 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 SLC35B4Q969S0 331 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 CDRT15Q96T59 188 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 THTPAQ9BU02 230 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 RSPO3Q9BXY4 272 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 ADAM19Q9H013 955 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 KAT8Q9H7Z6 458 aaKnown RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 NANOGQ9H9S0 305 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 CACYBPQ9HB71 228 aaKnown RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 CTPS2Q9NRF8 586 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 RRP15Q9Y3B9 282 aaKnown RBP11.49□□□□□ -0.57
CLCN6-205ENST00000376492 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 MALRD1Q5VYJ5 2156 aa11.49□□□□□ -0.57
CLCN6-205ENST00000376492 IGHV4-61A0A0C4DH41 118 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 GKN3PP0CG01 181 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 APEHP13798 732 aaKnown RBP11.48□□□□□ -0.57
CLCN6-205ENST00000376492 UQCRBP14927 111 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 PRKAR1BP31321 381 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 NTF4P34130 210 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 NR4A2P43354 598 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 CLK1P49759 484 aaKnown RBP11.48□□□□□ -0.57
CLCN6-205ENST00000376492 DIO1P49895 249 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 GZMMP51124 257 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 MTPNP58546 118 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 RBBP4Q09028 425 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 RIPK1Q13546 671 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 SCARB2Q14108 478 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 SELPLGQ14242 412 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 TRIM25Q14258 630 aaKnown RBP11.48□□□□□ -0.57
CLCN6-205ENST00000376492 ABLIM2Q6H8Q1 611 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 ERICH5Q6P6B1 374 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 TMPPEQ6ZT21 453 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 PTOV1Q86YD1 416 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 SLC15A3Q8IY34 581 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 HIPK4Q8NE63 616 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 APH1AQ96BI3 265 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 ASB9Q96DX5 294 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 DNAJA3Q96EY1 480 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 SPATA5L1Q9BVQ7 753 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 CHRNA9Q9UGM1 479 aa11.48□□□□□ -0.57
CLCN6-205ENST00000376492 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-205ENST00000376492 YLPM1P49750 1951 aaKnown RBP11.48□□□□□ -0.57
CLCN6-205ENST00000376492 IGKV3D-15A0A087WSY6 115 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF716A6NP11 495 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF208O43345 1280 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 SERPINB7O75635 380 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 CIB2O75838 187 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 ITGA5P08648 1049 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 HNF1AP20823 631 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 TACR3P29371 465 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 PDLIM4P50479 330 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 POLR2HP52434 150 aaKnown RBP11.47□□□□□ -0.57
CLCN6-205ENST00000376492 GABRA6Q16445 453 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 CARTPTQ16568 116 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 SYT14P1Q58G82 188 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 MTX3Q5HYI7 312 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 WBP2NLQ6ICG8 309 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 DHRS4L2Q6PKH6 230 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 KRT73Q86Y46 540 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 SLC30A8Q8IWU4 369 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 DEPDC4Q8N2C3 294 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 C11orf65Q8NCR3 313 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 UTP4Q969X6 686 aaKnown RBP11.47□□□□□ -0.57
CLCN6-205ENST00000376492 SORCS2Q96PQ0 1159 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 ZNF607Q96SK3 696 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 PIMREGQ9BSJ6 248 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 ASB6Q9NWX5 421 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 TAS2R16Q9NYV7 291 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 EMC3Q9P0I2 261 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 OSGIN1Q9UJX0 560 aa11.47□□□□□ -0.57
CLCN6-205ENST00000376492 NOSIPQ9Y314 301 aaKnown RBP11.47□□□□□ -0.57
CLCN6-205ENST00000376492 TMED7-TICAM2A0A0A6YYA0 188 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 PRORSD1PA6NEY8 169 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 STAMBPO95630 424 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 TGFAP01135 160 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 PRG2P13727 222 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 SLC7A2P52569 658 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 PCBP3P57721 371 aaKnown RBP11.46□□□□□ -0.57
CLCN6-205ENST00000376492 ACTR3P61158 418 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 COPZ1P61923 177 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 CSNK2A1P68400 391 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-205ENST00000376492 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 CYP51A1Q16850 503 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 MST1LQ2TV78 715 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 CR1LQ2VPA4 569 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 CALHM3Q86XJ0 350 aa11.46□□□□□ -0.57
CLCN6-205ENST00000376492 BHLHE22Q8NFJ8 381 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms