RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FXYD6P3P58550 94 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ADGRF1Q5T601 910 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ETV3LQ6ZN32 361 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 LMNTD1Q8N9Z9 388 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 MYLIPQ8WY64 445 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 RHOVQ96L33 236 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 HSPA12BQ96MM6 686 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TEX101Q9BY14 249 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ZDHHC5Q9C0B5 715 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CXXC1Q9P0U4 656 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ATXN7L1Q9ULK2 861 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 UNC119BA6NIH7 251 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 M0QZ92 97 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 RTCAO00442 366 aaKnown RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 LILRB5O75023 590 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 GJB5O95377 273 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CD74P04233 296 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ITGB2P05107 769 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 AKAIN1P0CW23 69 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ITGA3P26006 1051 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TEAD1P28347 426 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 GABRR2P28476 465 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 HGFACQ04756 655 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 MST1LQ2TV78 715 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM244Q5VVB8 128 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 LIPNQ5VXI9 398 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 LPCAT3Q6P1A2 487 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 VRK2Q86Y07 508 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 LILRA3Q8N6C8 439 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 OR10R2Q8NGX6 335 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 PPP1R1CQ8WVI7 109 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM159Q96B96 161 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM68Q96MH6 324 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TSPAN10Q9H1Z9 355 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CMC2Q9NRP2 79 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ZCCHC3Q9NUD5 404 aaKnown RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CD84Q9UIB8 345 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 PCDHGA1Q9Y5H4 931 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 OR51B4Q9Y5P0 310 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 KIF26AQ9ULI4 1882 aaPredicted RBP11.83□□□□□ -0.51
PRPF4-201ENST00000374198 METTL21EPA6NDL7 271 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 FAM86C2PA6NEL3 165 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 PLPP1O14494 284 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 EMC8O43402 210 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 CD2P06729 351 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SFTPCP11686 197 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 TPT1P13693 172 aaKnown RBP11.83□□□□□ -0.52
PRPF4-201ENST00000374198 GTF2F2P13984 249 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 RAB5CP51148 216 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 ATP1B3P54709 279 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SPCS3P61009 180 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 ELAVL1Q15717 326 aaKnown RBP11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SSX2Q16385 188 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 NDUFAF7Q7L592 441 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 INO80EQ8NBZ0 244 aaPredicted RBP11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SLC30A7Q8NEW0 376 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 PIK3IP1Q96FE7 263 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SLC41A3Q96GZ6 507 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SEC22AQ96IW7 307 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 AHSPQ9NZD4 102 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 F8VVB4 439 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 F8VWA3 439 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 FUT1P19526 365 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SLC2A5P22732 501 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 EDNRAP25101 427 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 PRKAG1P54619 331 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 FOXK2Q01167 660 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
PRPF4-201ENST00000374198 FAM111BQ6SJ93 734 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 PRSS55Q6UWB4 352 aaPredicted RBP11.83□□□□□ -0.52
PRPF4-201ENST00000374198 NXPE4Q6UWF7 544 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF383Q8NA42 475 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 ZG16BQ96DA0 208 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 VWCEQ96DN2 955 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 DPH1Q9BZG8 443 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 SYNPO2LQ9H987 977 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 ETV7Q9Y603 341 aa11.83□□□□□ -0.52
PRPF4-201ENST00000374198 A0A0A6YYC8 382 aaPredicted RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 GRXCR1A8MXD5 290 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 RNASEK-C17orf49H0YIS7 233 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 I3L1I5 382 aaPredicted RBP11.82□□□□□ -0.52
PRPF4-201ENST00000374198 STC2O76061 302 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 PAPLNO95428 1278 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 CD1AP06126 327 aa11.82□□□□□ -0.52
PRPF4-201ENST00000374198 RHOP08100 348 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms