RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 RHPN2P1A8MT19 583 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 HCRTR2O43614 444 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 RPL6Q02878 288 aaKnown RBP21.65■■□□□ 1.06
CDK9-201ENST00000373264 TCTE1Q5JU00 501 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 ZNF684Q5T5D7 378 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 SLITRK4Q8IW52 837 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 C9orf40Q8IXQ3 194 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 OR6V1Q8N148 313 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 GPX7Q96SL4 187 aaPredicted RBP21.65■■□□□ 1.06
CDK9-201ENST00000373264 SERPINA3P01011 423 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 IGKV3-11P04433 115 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 FOLR1P15328 257 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 GIFP27352 417 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 SOX2P48431 317 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 NR0B1P51843 470 aaKnown RBP21.65■■□□□ 1.06
CDK9-201ENST00000373264 C17orf82Q86X59 251 aaPredicted RBP21.65■■□□□ 1.06
CDK9-201ENST00000373264 CMTM4Q8IZR5 234 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 HAVCR2Q8TDQ0 301 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 CREB3L1Q96BA8 519 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 MS4A3Q96HJ5 214 aa21.65■■□□□ 1.06
CDK9-201ENST00000373264 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.65■■□□□ 1.06
CDK9-201ENST00000373264 MRM2Q9UI43 246 aaKnown RBP21.65■■□□□ 1.06
CDK9-201ENST00000373264 BLACEA4D250 179 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 ARL6IP5O75915 188 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 PLGP00747 810 aaPredicted RBP21.64■■□□□ 1.05
CDK9-201ENST00000373264 MT-ND4P03905 459 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 FAPQ12884 760 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 COL19A1Q14993 1142 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 C16orf47Q6ZP98 133 aaPredicted RBP21.64■■□□□ 1.05
CDK9-201ENST00000373264 TCTE3Q8IZS6 198 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 ZNF527Q8NB42 609 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 DNAAF1Q8NEP3 725 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 LCORQ96JN0 433 aaPredicted RBP21.64■■□□□ 1.05
CDK9-201ENST00000373264 LRFN5Q96NI6 719 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 C11orf98E9PRG8 122 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 SRFP11831 508 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 ITPKBP27987 946 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 UQCRC1P31930 480 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 RPS15P62841 145 aaKnown RBP21.64■■□□□ 1.05
CDK9-201ENST00000373264 FCN2Q15485 313 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 C14orf28Q4W4Y0 310 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 SLC19A3Q9BZV2 496 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 BEX1Q9HBH7 125 aa21.64■■□□□ 1.05
CDK9-201ENST00000373264 TNRC18O15417 2968 aaPredicted RBP21.63■■□□□ 1.05
CDK9-201ENST00000373264 IGKV3D-11A0A0A0MRZ8 115 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 MBTPS2O43462 519 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 ZNF217O75362 1048 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 AKR7A3O95154 331 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 PNMTP11086 282 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 SDHAP31040 664 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 RORAP35398 523 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 ZSWIM7Q19AV6 140 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 YIF1BQ5BJH7 314 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 SLC35D3Q5M8T2 416 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 FAM205BPQ63HN1 556 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 UNQ9370/PRO34162Q6UXP9 181 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 LRRC69Q6ZNQ3 347 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.63■■□□□ 1.05
CDK9-201ENST00000373264 TOMM5Q8N4H5 51 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 OR7G1Q8NGA0 311 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 OR10AC1Q8NH08 325 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 MAP6Q96JE9 813 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 AMELYQ99218 206 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 SYT4Q9H2B2 425 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 ZCCHC4Q9H5U6 513 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 ZNF879B4DU55 563 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 NUDT14O95848 222 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 LIPNQ5VXI9 398 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 ADAD1Q96M93 576 aaKnown RBP21.63■■□□□ 1.05
CDK9-201ENST00000373264 SLC46A1Q96NT5 459 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 FRRS1LQ9P0K9 344 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 GRHPRQ9UBQ7 328 aa21.63■■□□□ 1.05
CDK9-201ENST00000373264 PCDHGA9Q9Y5G4 932 aaKnown RBP21.63■■□□□ 1.05
CDK9-201ENST00000373264 IGHV3-20A0A0C4DH32 117 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 LMO7DNF2Z398 122 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 UPK3AO75631 287 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 NSDHLQ15738 373 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 CHRDL2Q6WN34 429 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 LANCL3Q6ZV70 420 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 ZNF440Q8IYI8 595 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 BEST4Q8NFU0 473 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 TTYH1Q9H313 450 aaPredicted RBP21.62■■□□□ 1.05
CDK9-201ENST00000373264 UCK1Q9HA47 277 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 SLC2A4RGQ9NR83 387 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 ZNF281Q9Y2X9 895 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 UBL3O95164 117 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 CSF2RBP32927 897 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 ADH7P40394 386 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 GZMKP49863 264 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 FAM199XQ6PEV8 388 aaPredicted RBP21.62■■□□□ 1.05
CDK9-201ENST00000373264 DPY19L4Q7Z388 723 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 NANOGNBQ7Z5D8 188 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 TIGD4Q8IY51 512 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 PM20D2Q8IYS1 436 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 OR51A4Q8NGJ6 313 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 AKAP1Q92667 903 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDK9-201ENST00000373264 ATOH1Q92858 354 aaPredicted RBP21.62■■□□□ 1.05
CDK9-201ENST00000373264 SLC25A36Q96CQ1 311 aa21.62■■□□□ 1.05
CDK9-201ENST00000373264 SLC25A38Q96DW6 304 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms