RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TXNDC15Q96J42 360 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 NICN1Q9BSH3 213 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 C11orf54Q9H0W9 315 aaPredicted RBP10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 MAN2C1Q9NTJ4 1040 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 EMC3Q9P0I2 261 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 DLEC1Q9Y238 1755 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 A0A087WV62 115 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 MEIS3P1A6NDR6 274 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 IGHEP01854 428 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 TRAPPC2P0DI81 140 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 TRAPPC2BP0DI82 140 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 FASLGP48023 281 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 CAMLGP49069 296 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 GALEQ14376 348 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 OXA1LQ15070 435 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 FOXB2Q5VYV0 432 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 BAHD1Q8TBE0 780 aaPredicted RBP10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 DYNC2LI1Q8TCX1 351 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 GIMAP1Q8WWP7 306 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 Q96M85 177 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 SLC25A19Q9HC21 320 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 ATP13A2Q9NQ11 1180 aa10.94□□□□□ -0.66
DEPDC1-201ENST00000370966 ATP1B1P05026 303 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 POU3F2P20265 443 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 MSX1P28360 303 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 CD1CP29017 333 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 BDKRB2P30411 391 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 SLC35A1P78382 337 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 GPR176Q14439 515 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 YOD1Q5VVQ6 348 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 LILRA6Q6PI73 481 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 SLC16A9Q7RTY1 509 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 PPP1R35Q8TAP8 253 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 SLC6A18Q96N87 628 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 TEX101Q9BY14 249 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 ZNF436Q9C0F3 470 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 ENKD1Q9H0I2 346 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 NTN4Q9HB63 628 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 HINT3Q9NQE9 182 aaKnown RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 VSX1Q9NZR4 365 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 BOKQ9UMX3 212 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 WIF1Q9Y5W5 379 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 H7C1C5 153 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 YKT6O15498 198 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 NSA2O95478 260 aaKnown RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 TCRBP04435 133 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 MAOAP21397 527 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 ATP1B3P54709 279 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 LCN6P62502 163 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 SF3B4Q15427 424 aaKnown RBP eCLIP10.93□□□□□ -0.668e-9■■■■■ 39.1
DEPDC1-201ENST00000370966 CLVS2Q5SYC1 327 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 VASH1Q7L8A9 365 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 GRINAQ7Z429 371 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 TMEM179BQ7Z7N9 219 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 LIX1LQ8IVB5 337 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 IL17RDQ8NFM7 739 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 NLGN4YQ8NFZ3 816 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 OR7G2Q8NG99 324 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 GOT1L1Q8NHS2 421 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 FOXN4Q96NZ1 517 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 NDUFB11Q9NX14 153 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 A0A1B0GX78 115 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 FUCA1P04066 466 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 CHRM4P08173 479 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 APLNRP35414 380 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 CCR5P51681 352 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 MEP1BQ16820 701 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 SULF2Q8IWU5 870 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 MKXQ8IYA7 352 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 OR56B1Q8NGI3 324 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 EDAQ92838 391 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 HLA-CQ95604 372 aa10.93□□□□□ -0.66
DEPDC1-201ENST00000370966 FGF17O60258 216 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 PIP5K1CO60331 668 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 FCMRO60667 390 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 CD22P20273 847 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 GDF1P27539 372 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 CLDN12P56749 244 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 FXYD4P59646 89 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 EEF1A2Q05639 463 aaKnown RBP10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 IHHQ14623 411 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 TMEM201Q5SNT2 666 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 ANKRD34AQ69YU3 496 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 COX15Q7KZN9 410 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 CD163Q86VB7 1156 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 KCNG3Q8TAE7 436 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 SMAP2Q8WU79 429 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 NUP214P35658 2090 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 TMEM82A0PJX8 343 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 EIF1BO60739 113 aaKnown RBP10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 DPM1O60762 260 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 CEACAM5P06731 702 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 UBCP0CG48 685 aaKnown RBP10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 TPT1P13693 172 aaKnown RBP10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 CPEP16870 476 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 ETV5P41161 510 aa10.92□□□□□ -0.66
DEPDC1-201ENST00000370966 ETV1P50549 477 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms